Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20islandicus_20[genbank_20GCA_5F000985935.1_202015-04- 29] 116 sequences; 34,715,840 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq42 197 3e-48 seq34 196 1e-47 >seq42 Length=11487 Score = 197 bits (218), Expect = 3e-48 Identities = 282/382 (74%), Gaps = 14/382 (4%) Strand=Plus/Plus Query 42 GTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATC 101 || ||||||||||||||| || ||||| |||| ||||||| ||| || ||| || Sbjct 766 GTGGGTTCGGTCCTCCAGCGTGTT-TTACCACGCCTT-CAACCTGGTCATGGG-TAGGTC 822 Query 102 GCCCGGTTTTCGGGTCTATTTCCCAGCGACTAGA-CGCCCTAGTAAGACTCGCTTTTCGC 160 | ||||| |||||||| || | ||| |||||| | ||||||||||| ||| Sbjct 823 ACTTGGTTT-CGGGTCTACGTCAT-GATACTCTCTCGCCCTCTTCAGACTCGCTTT-CGC 879 Query 161 TACGCCTCCC-CTATTCGG--TTAAGCTTTGCCACTGAAAATAAGTCGCTGACCCATTAT 217 | || |||| || ||| | |||| ||| || | || ||| |||| | |||| | Sbjct 880 TCCGGCTCCGTCTTTTCTGACTTAACCTT-GCACCATAACGTAACTCGCCGGTTCATTCT 938 Query 218 ACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGTACGCATACGGTTTC 277 |||||||| |||| | || | || ||| || ||| |||||| ||| |||||||| Sbjct 939 ACAAAAGGCACGCCATTACACTTTAATGTG--CTTTGACTACTTGTAGGCACACGGTTTC 996 Query 278 AGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTC 337 ||| ||| |||||||||||| ||||||||||||||| |||||||||||||||||| |||| Sbjct 997 AGGTTCTCTTTCACTCCCCT-TCCGGGGTTCTTTTCACCTTTCCCTCACGGTACTGGTTC 1055 Query 338 ACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAG 397 ||||||||||| | ||||||||||||||| |||||||| | | |||| | Sbjct 1056 ACTATCGGTCACTAGTTAGTATTTAGCCTTGCGAGATGGTCCTCGCGGTTTCAATCGGGA 1115 Query 398 TTTCTCGTGCTCCGTCCTACTC 419 || |||||| ||| ||||||| Sbjct 1116 TTCCTCGTGTCCCGACCTACTC 1137 >seq34 Length=22252 Score = 196 bits (216), Expect = 1e-47 Identities = 309/431 (72%), Gaps = 34/431 (8%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||||||||| || | | |||||||| | || |||||||||||||| || || Sbjct 1121 CCACAGGTCATCCCCC--AGGTTTTCAACCCTGGTGGGTTCGGTCCTCCACACGGTC-TT 1065 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 |||| ||| |||||||||||| || |||||| | | | || ||||||| | | || Sbjct 1064 ACCCGCGCTT-CAACCTGCCCAT-GGCTAGATCACTCCGCTT-CGGGTCTTGAGCGC-GC 1009 Query 129 GACTAGA-CGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAGCTTT 187 |||| | ||||||| | |||||||||| ||||||| || ||| | ||| | | | | Sbjct 1008 TACTAAATCGCCCTATTCGGACTCGCTTT-CGCTACGGCTTCCCCACACGGGTTAACCTC 950 Query 188 GC----CACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACA- 242 || ||| | ||| |||| | | |||| | ||||||| |||||||||| || Sbjct 949 GCAACACACCGCAAAC---TCGCAGGCTCATTCTTCAAAAGGCACGCAGTCACGACGCAC 893 Query 243 -----AAGTGGG----------CTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATT 287 |||| | ||||||| ||||||| ||| ||||||||||| ||||| Sbjct 892 CGGACAAGTCCGATGCGCGACGCTCCCACGGCTTGTAGGCACACGGTTTCAGGTACTATT 833 Query 288 TCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTC 347 ||||||| ||| ||| ||| |||||| || |||||||||||||||| | | ||||||||| Sbjct 832 TCACTCCGCTC-CCGCGGTACTTTTCACCATTCCCTCACGGTACTA-TCCGCTATCGGTC 775 Query 348 AGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGC 407 | | | ||||||| ||| | || ||||||| ||| ||||| || ||||||| || Sbjct 774 ACCAGGGAATATTTAGGCTTAGCGGGTGGTCCCGCCAGATTCACACGGGATTTCTCGGGC 715 Query 408 TCCGTCCTACT 418 |||| ||||| Sbjct 714 CCCGTGCTACT 704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241598559744