Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20islandicus_20[genbank_20GCA_5F000985935.1_202015-04- 29] 116 sequences; 34,715,840 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq42 98.7 7e-19 seq34 75.2 8e-12 >seq42 Length=11487 Score = 98.7 bits (108), Expect = 7e-19 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || ||||||||||||||| ||||||| |||||| || ||||| |||||||| | || Sbjct 10538 TAGCTTTTATCCGTTGAGTGATGGCCTTTCCATGCAGTACCACCAGATCACTAAGCCCGA 10597 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||||| |||||| || ||| |||||||| |||||| | ||| | || || |||| | Sbjct 10598 CTTTCGTCCCTGCTCGAGGTGTACCTCTCGCAGTCAAGCTCCCTTATACCTTTACACTCT 10657 Query 121 CACTACGATTTCCGACC 137 | ||||||| ||| Sbjct 10658 GCGAATGATTTCCAACC 10674 >seq34 Length=22252 Score = 75.2 bits (82), Expect = 8e-12 Identities = 91/121 (75%), Gaps = 6/121 (5%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCG---GATCACTATGAC 57 ||||||||||||||||||||| ||| |||||| || |||||||| |||||||| | Sbjct 2910 TACCTTTTATCCGTTGAGCGACGGCGCTTCCA--CA-AGCCACCGCCGGATCACTAGTCC 2854 Query 58 CTGCTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCAC 117 | |||||| |||||| | || | |||| || |||||| | ||| ||| || ||| Sbjct 2853 CGACTTTCGTCCCTGCTCGACCCGTCGGTCTCACAGTCAAGCTCCCTTGTGCACTTACAC 2794 Query 118 T 118 | Sbjct 2793 T 2793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351999617200