Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07- 18] 9 sequences; 36,512,172 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq2 309 5e-82 >seq2 Length=6009755 Score = 309 bits (342), Expect = 5e-82 Identities = 243/282 (86%), Gaps = 8/282 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||| Sbjct 6593 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 6536 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| |||||||||||| |||| |||||||||||||||||||||||||||| |||| Sbjct 6535 GCCGCGACGCTACCATCTGCCGGATAATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 6476 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTC--GGCCCCGA 178 ||||| || ||| | || |||| ||||||| |||||||||||||| || |||| || Sbjct 6475 GAACGCGGCGATGTTGCCCCGCACGTCGTAGTTGGATACGAATAGGCCTCCGGGCCACGC 6416 Query 179 ACCTTAGCAGGCCGGCAACGGGCGTCCCGCG-GAAG-CGCGGGGCGCTCAGCTGGCGGAT 236 |||| ||||||| ||| || |||| |||| | |||| | |||| |||| |||||||||| Sbjct 6415 ACCTCAGCAGGCTGGCGAC-GGCGACCCGGGAGAAGCCCCGGGCCGCT-GGCTGGCGGAT 6358 Query 237 TGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||||| |||||| |||| |||||||||||| |||||||||| Sbjct 6357 TGCAATGTCACCACGCGCGGGGATAAATCCTCTGCAGACGAC 6316 Score = 309 bits (342), Expect = 5e-82 Identities = 243/282 (86%), Gaps = 8/282 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||| Sbjct 14739 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 14682 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| |||||||||||| |||| |||||||||||||||||||||||||||| |||| Sbjct 14681 GCCGCGACGCTACCATCTGCCGGATAATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 14622 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTC--GGCCCCGA 178 ||||| || ||| | || |||| ||||||| |||||||||||||| || |||| || Sbjct 14621 GAACGCGGCGATGTTGCCCCGCACGTCGTAGTTGGATACGAATAGGCCTCCGGGCCACGC 14562 Query 179 ACCTTAGCAGGCCGGCAACGGGCGTCCCGCG-GAAG-CGCGGGGCGCTCAGCTGGCGGAT 236 |||| ||||||| ||| || |||| |||| | |||| | |||| |||| |||||||||| Sbjct 14561 ACCTCAGCAGGCTGGCGAC-GGCGACCCGGGAGAAGCCCCGGGCCGCT-GGCTGGCGGAT 14504 Query 237 TGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||||| |||||| |||| |||||||||||| |||||||||| Sbjct 14503 TGCAATGTCACCACGCGCGGGGATAAATCCTCTGCAGACGAC 14462 Score = 309 bits (342), Expect = 5e-82 Identities = 243/282 (86%), Gaps = 8/282 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||| Sbjct 21631 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 21574 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| |||||||||||| |||| |||||||||||||||||||||||||||| |||| Sbjct 21573 GCCGCGACGCTACCATCTGCCGGATAATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 21514 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTC--GGCCCCGA 178 ||||| || ||| | || |||| ||||||| |||||||||||||| || |||| || Sbjct 21513 GAACGCGGCGATGTTGCCCCGCACGTCGTAGTTGGATACGAATAGGCCTCCGGGCCACGC 21454 Query 179 ACCTTAGCAGGCCGGCAACGGGCGTCCCGCG-GAAG-CGCGGGGCGCTCAGCTGGCGGAT 236 |||| ||||||| ||| || |||| |||| | |||| | |||| |||| |||||||||| Sbjct 21453 ACCTCAGCAGGCTGGCGAC-GGCGACCCGGGAGAAGCCCCGGGCCGCT-GGCTGGCGGAT 21396 Query 237 TGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||||| |||||| |||| |||||||||||| |||||||||| Sbjct 21395 TGCAATGTCACCACGCGCGGGGATAAATCCTCTGCAGACGAC 21354 Score = 309 bits (342), Expect = 5e-82 Identities = 243/282 (86%), Gaps = 8/282 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||| Sbjct 29779 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 29722 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| |||||||||||| |||| |||||||||||||||||||||||||||| |||| Sbjct 29721 GCCGCGACGCTACCATCTGCCGGATAATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 29662 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTC--GGCCCCGA 178 ||||| || ||| | || |||| ||||||| |||||||||||||| || |||| || Sbjct 29661 GAACGCGGCGATGTTGCCCCGCACGTCGTAGTTGGATACGAATAGGCCTCCGGGCCACGC 29602 Query 179 ACCTTAGCAGGCCGGCAACGGGCGTCCCGCG-GAAG-CGCGGGGCGCTCAGCTGGCGGAT 236 |||| ||||||| ||| || |||| |||| | |||| | |||| |||| |||||||||| Sbjct 29601 ACCTCAGCAGGCTGGCGAC-GGCGACCCGGGAGAAGCCCCGGGCCGCT-GGCTGGCGGAT 29544 Query 237 TGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||||| |||||| |||| |||||||||||| |||||||||| Sbjct 29543 TGCAATGTCACCACGCGCGGGGATAAATCCTCTGCAGACGAC 29502 Score = 309 bits (342), Expect = 5e-82 Identities = 243/282 (86%), Gaps = 8/282 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||| Sbjct 37926 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 37869 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| |||||||||||| |||| |||||||||||||||||||||||||||| |||| Sbjct 37868 GCCGCGACGCTACCATCTGCCGGATAATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 37809 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTC--GGCCCCGA 178 ||||| || ||| | || |||| ||||||| |||||||||||||| || |||| || Sbjct 37808 GAACGCGGCGATGTTGCCCCGCACGTCGTAGTTGGATACGAATAGGCCTCCGGGCCACGC 37749 Query 179 ACCTTAGCAGGCCGGCAACGGGCGTCCCGCG-GAAG-CGCGGGGCGCTCAGCTGGCGGAT 236 |||| ||||||| ||| || |||| |||| | |||| | |||| |||| |||||||||| Sbjct 37748 ACCTCAGCAGGCTGGCGAC-GGCGACCCGGGAGAAGCCCCGGGCCGCT-GGCTGGCGGAT 37691 Query 237 TGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||||| |||||| |||| |||||||||||| |||||||||| Sbjct 37690 TGCAATGTCACCACGCGCGGGGATAAATCCTCTGCAGACGAC 37649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819199928576