Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03- 01] 33 sequences; 31,644,316 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq2 324 6e-86 >seq2 Length=4789688 Score = 324 bits (358), Expect = 6e-86 Identities = 211/231 (91%), Gaps = 1/231 (0%) Strand=Plus/Minus Query 6 GACCGGTGGCCTAG-CCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGC 64 ||| | ||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2493380 GACGGATGGCCGCGTCCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGC 2493321 Query 65 TCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACA 124 ||||||| || |||||||| | ||||||||| |||| ||||| ||||||||||||||||| Sbjct 2493320 TCTAAATAGGTGGTAAATTCCATCTAAAGCTGAATACTGGCCGGAGACCGATAGCGCACA 2493261 Query 125 AGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATT 184 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 2493260 AGTAGAGTGATCGAAAGATGAAAAGCACTTTGAAAAGAGAGTTAAATAGCACGTGAAATT 2493201 Query 185 GTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGC 235 |||||||||||||||||||| |||||||| |||||| | ||||| ||||| Sbjct 2493200 GTTGAAAGGGAAGCGCTTGCGACCAGACTCGCCCGCGGGGGCTCAGCCGGC 2493150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999292150