Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03- 01] 33 sequences; 31,644,316 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1 199 3e-46 >seq1 Length=6618042 Score = 199 bits (220), Expect = 3e-46 Identities = 443/661 (67%), Gaps = 4/661 (1%) Strand=Plus/Plus Query 66299 GGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATC 66358 || || | ||| | ||| ||||| | | || ||||| ||| || || || || || Sbjct 2615656 GGGCAGAACAGTGTCCAGTCACCGTTCGCCTCGACACGCTTCATGAAGAGGTCCGGAGTC 2615715 Query 66359 CAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAG 66418 ||||| |||||||||||||| || |||| || || ||||||| || ||||| | Sbjct 2615716 CAGAGAGCGTAGAAGAGATCACGAGCTCTAACTTCTTCCTTGCCGTGGTTCTTGCGAAGA 2615775 Query 66419 TCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATA 66478 || | ||| || ||||| || | ||||| || ||||||||||| ||||| | || Sbjct 2615776 TCCAAGAAGTCGAAGATATCAGAGTGCCAAGGCTCCAGGTAGATAGCGAAAGCACCAGGG 2615835 Query 66479 CGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGT 66538 || ||| || || ||||||||||| | || ||||||||||| || | ||| || Sbjct 2615836 CGCTTGTTTCCTCCCTGGTCGACGTATCTGGCAGTGTTGTTGAAGACCCGGAGCATGGGG 2615895 Query 66539 ACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCG 66598 || | ||||| || |||||||| || |||| ||| || || || ||| | Sbjct 2615896 ACAATTCCGTTGGAAGATCCATTGGTACCAGAGATGTAGGAGCCGGTGGCGCGGATACGG 2615955 Query 66599 TGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAA-TC-GGCCACTG 66656 || | || |||||||||||||| || ||||| ||||| |||||| || | | || Sbjct 2615956 TGGATGTTGAGACCAATACCACCAGCGGTCTTTGAGATCAGCGCACAAGTCTTGAGAGTG 2616015 Query 66657 TCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTT 66716 || | | || || |||||| ||| |||| ||| | |||| |||| || || | Sbjct 2616016 TC--GTAAATACCCTCAATGCTGTCTTCCTTCATGTCGACGAGGAAGCAGGAGGCGAGCT 2616073 Query 66717 GGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAG 66776 | || | || || |||| ||| ||||| || | ||| || || ||||| | | | Sbjct 2616074 GCGGCTGAGGAGTACCGGCGTTGAACAGGGTTGGAGAAGCATGAGTGAAGTACTTCTGGG 2616133 Query 66777 ACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCAC 66836 |||| ||||||||||| ||||| ||||||| || || || || || | ||| Sbjct 2616134 ACATCAGGTTGTACGTCTCAATGACCTTCTCAATGTCATCACCGTGGATTCCAACAGCAA 2616193 Query 66837 ATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGG 66896 ||||| | | || || || ||||| | | | | ||||| | | ||||| | Sbjct 2616194 CACGCATAATCATGTGCTGGGGACGTTCCGCAACCTTGCCATTGATCCGAAGCAAGTATG 2616253 Query 66897 AGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATCGTTAGCATGCACGATGG 66956 |||| ||||||||||||| || || || || ||||| || ||| |||||||| Sbjct 2616254 AGCGCTCCAGGGTCTTGAATCCGAAATATTGATAGTTGAAGTCACGGTCATACACGATGG 2616313 Query 66957 C 66957 | Sbjct 2616314 C 2616314 Score = 136 bits (150), Expect = 3e-27 Identities = 141/185 (76%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 66008 GCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCG 66067 |||||||| || | |||||||||||| | ||||||||| ||| ||||||||| ||| || Sbjct 2615314 GCAAGAGAGGCCAAGTTGCAGACAGCAACCTCGTCAGGGGCGCTATACTCGATAATCTCA 2615373 Query 66068 GTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCAT 66127 ||||| || || || ||| || || |||| |||| || || ||||| | ||||| Sbjct 2615374 GTGCAGAGGTTGGAGCTGCGGATAGTACCCAGGTTCTTCTGGTTGCTCTTCCTGTTGCAA 2615433 Query 66128 GCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGC 66187 ||||||||||||| |||| | || || |||||||| || | ||| | ||||||| | Sbjct 2615434 GCATCCTTGTACAGCATGAATGGGGTTCCGGTCTCCGTCTGCGCCTCGAGAATGGCGTAC 2615493 Query 66188 CAAAG 66192 ||||| Sbjct 2615494 CAAAG 2615498 Score = 123 bits (136), Expect = 2e-23 Identities = 303/448 (68%), Gaps = 10/448 (2%) Strand=Plus/Plus Query 65105 GCCGCCTTGGTCCTAAGATAGTACATGCCGGTCTTGAGGCCAGCACGCCAAGCATAGAAA 65164 || ||| | || | ||| ||||||||||| ||||| || || ||| || ||| Sbjct 2614429 GCAGCCATAGTACGAAGGTAGTACATGCCAGTCTTCAGACCCATCTTCCACCCAGCGAAG 2614488 Query 65165 TGCATCGATGATAATTTTGCATA-ATTCGGCTCGGCCACATGCATATTCAACGACTGACT 65223 ||||| | || |||| |||| | | | ||||| || || || || | |||||| Sbjct 2614489 TGCAT-GCTGGTAATCTTGCCCATAGTAGGCTCCTTCATGTGAATGTTGAGAGACTGAGA 2614547 Query 65224 CTGATCGATGTAACG-ACCACGATCTGCAGCCATGTCAATGATACGACGTCCCGATATCT 65282 ||| |||||| |||| |||||| || |||||||| | || |||| | || ||| |||| Sbjct 2614548 CTGGTCGATG-AACGCACCACGGTCAGCAGCCATCTGAAGGATATGGCGCTGCGAGATCT 2614606 Query 65283 CCCAGACGGTCTTGTACAGGCGACGT-ACCTCAATTGGAATCTCCTCAATGTCCTGGACT 65341 |||| || |||||||| ||| | | | | || || || | ||||| ||| | Sbjct 2614607 CCCACACTGTCTTGTAGAGG-GCCTTGATGTCTGCAGGGATGTTGGGAATGTTCTGAATA 2614665 Query 65342 GAACCACGACGTGCAATAATGCGATTACGCATCGACTCTGACCACAAACCCAAATCGATA 65401 ||||||| ||||| || || || ||| || ||||| | || | |||| | Sbjct 2614666 GAACCACCTTCGGCAATGATACGGTTCTTCATGTTGTCAGACCAGAGGCCAAGGTCGACA 2614725 Query 65402 AGAT-GTTGAACCAAGTGA-CGATTGATGACTTGGAACTCGCCGGACAGTACACGACGGA 65459 |||| |||| | || | | |||| |||||||||||||||| || ||||||||| Sbjct 2614726 AGATCCTTGAGC--AGCCAGGGGTTGACAACTTGGAACTCGCCGGCAAGAACACGACGGG 2614783 Query 65460 CATAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAG 65519 ||||||||| || ||| ||| || ||| ||||| | ||| || || || || Sbjct 2614784 AATAGATGTTCGAGGTGTAGGGCTCGAAGCATTCATTAAAGCCGAGGATCTGACTGGTGC 2614843 Query 65520 ATGCAGTTGGCATGGGAGCGACCAACAA 65547 ||||| ||||| ||||| || | ||| Sbjct 2614844 TCGCAGTGGGCATAGGAGCCACGAGCAA 2614871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567840103120