Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq1 199 3e-46
>seq1
Length=6618042
Score = 199 bits (220), Expect = 3e-46
Identities = 443/661 (67%), Gaps = 4/661 (1%)
Strand=Plus/Plus
Query 66299 GGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATC 66358
|| || | ||| | ||| ||||| | | || ||||| ||| || || || || ||
Sbjct 2615656 GGGCAGAACAGTGTCCAGTCACCGTTCGCCTCGACACGCTTCATGAAGAGGTCCGGAGTC 2615715
Query 66359 CAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAG 66418
||||| |||||||||||||| || |||| || || ||||||| || ||||| |
Sbjct 2615716 CAGAGAGCGTAGAAGAGATCACGAGCTCTAACTTCTTCCTTGCCGTGGTTCTTGCGAAGA 2615775
Query 66419 TCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATA 66478
|| | ||| || ||||| || | ||||| || ||||||||||| ||||| | ||
Sbjct 2615776 TCCAAGAAGTCGAAGATATCAGAGTGCCAAGGCTCCAGGTAGATAGCGAAAGCACCAGGG 2615835
Query 66479 CGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGT 66538
|| ||| || || ||||||||||| | || ||||||||||| || | ||| ||
Sbjct 2615836 CGCTTGTTTCCTCCCTGGTCGACGTATCTGGCAGTGTTGTTGAAGACCCGGAGCATGGGG 2615895
Query 66539 ACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCG 66598
|| | ||||| || |||||||| || |||| ||| || || || ||| |
Sbjct 2615896 ACAATTCCGTTGGAAGATCCATTGGTACCAGAGATGTAGGAGCCGGTGGCGCGGATACGG 2615955
Query 66599 TGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAA-TC-GGCCACTG 66656
|| | || |||||||||||||| || ||||| ||||| |||||| || | | ||
Sbjct 2615956 TGGATGTTGAGACCAATACCACCAGCGGTCTTTGAGATCAGCGCACAAGTCTTGAGAGTG 2616015
Query 66657 TCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTT 66716
|| | | || || |||||| ||| |||| ||| | |||| |||| || || |
Sbjct 2616016 TC--GTAAATACCCTCAATGCTGTCTTCCTTCATGTCGACGAGGAAGCAGGAGGCGAGCT 2616073
Query 66717 GGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAG 66776
| || | || || |||| ||| ||||| || | ||| || || ||||| | | |
Sbjct 2616074 GCGGCTGAGGAGTACCGGCGTTGAACAGGGTTGGAGAAGCATGAGTGAAGTACTTCTGGG 2616133
Query 66777 ACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCAC 66836
|||| ||||||||||| ||||| ||||||| || || || || || | |||
Sbjct 2616134 ACATCAGGTTGTACGTCTCAATGACCTTCTCAATGTCATCACCGTGGATTCCAACAGCAA 2616193
Query 66837 ATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGG 66896
||||| | | || || || ||||| | | | | ||||| | | ||||| |
Sbjct 2616194 CACGCATAATCATGTGCTGGGGACGTTCCGCAACCTTGCCATTGATCCGAAGCAAGTATG 2616253
Query 66897 AGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATCGTTAGCATGCACGATGG 66956
|||| ||||||||||||| || || || || ||||| || ||| ||||||||
Sbjct 2616254 AGCGCTCCAGGGTCTTGAATCCGAAATATTGATAGTTGAAGTCACGGTCATACACGATGG 2616313
Query 66957 C 66957
|
Sbjct 2616314 C 2616314
Score = 136 bits (150), Expect = 3e-27
Identities = 141/185 (76%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 66008 GCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCG 66067
|||||||| || | |||||||||||| | ||||||||| ||| ||||||||| ||| ||
Sbjct 2615314 GCAAGAGAGGCCAAGTTGCAGACAGCAACCTCGTCAGGGGCGCTATACTCGATAATCTCA 2615373
Query 66068 GTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCAT 66127
||||| || || || ||| || || |||| |||| || || ||||| | |||||
Sbjct 2615374 GTGCAGAGGTTGGAGCTGCGGATAGTACCCAGGTTCTTCTGGTTGCTCTTCCTGTTGCAA 2615433
Query 66128 GCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGC 66187
||||||||||||| |||| | || || |||||||| || | ||| | ||||||| |
Sbjct 2615434 GCATCCTTGTACAGCATGAATGGGGTTCCGGTCTCCGTCTGCGCCTCGAGAATGGCGTAC 2615493
Query 66188 CAAAG 66192
|||||
Sbjct 2615494 CAAAG 2615498
Score = 123 bits (136), Expect = 2e-23
Identities = 303/448 (68%), Gaps = 10/448 (2%)
Strand=Plus/Plus
Query 65105 GCCGCCTTGGTCCTAAGATAGTACATGCCGGTCTTGAGGCCAGCACGCCAAGCATAGAAA 65164
|| ||| | || | ||| ||||||||||| ||||| || || ||| || |||
Sbjct 2614429 GCAGCCATAGTACGAAGGTAGTACATGCCAGTCTTCAGACCCATCTTCCACCCAGCGAAG 2614488
Query 65165 TGCATCGATGATAATTTTGCATA-ATTCGGCTCGGCCACATGCATATTCAACGACTGACT 65223
||||| | || |||| |||| | | | ||||| || || || || | ||||||
Sbjct 2614489 TGCAT-GCTGGTAATCTTGCCCATAGTAGGCTCCTTCATGTGAATGTTGAGAGACTGAGA 2614547
Query 65224 CTGATCGATGTAACG-ACCACGATCTGCAGCCATGTCAATGATACGACGTCCCGATATCT 65282
||| |||||| |||| |||||| || |||||||| | || |||| | || ||| ||||
Sbjct 2614548 CTGGTCGATG-AACGCACCACGGTCAGCAGCCATCTGAAGGATATGGCGCTGCGAGATCT 2614606
Query 65283 CCCAGACGGTCTTGTACAGGCGACGT-ACCTCAATTGGAATCTCCTCAATGTCCTGGACT 65341
|||| || |||||||| ||| | | | | || || || | ||||| ||| |
Sbjct 2614607 CCCACACTGTCTTGTAGAGG-GCCTTGATGTCTGCAGGGATGTTGGGAATGTTCTGAATA 2614665
Query 65342 GAACCACGACGTGCAATAATGCGATTACGCATCGACTCTGACCACAAACCCAAATCGATA 65401
||||||| ||||| || || || ||| || ||||| | || | |||| |
Sbjct 2614666 GAACCACCTTCGGCAATGATACGGTTCTTCATGTTGTCAGACCAGAGGCCAAGGTCGACA 2614725
Query 65402 AGAT-GTTGAACCAAGTGA-CGATTGATGACTTGGAACTCGCCGGACAGTACACGACGGA 65459
|||| |||| | || | | |||| |||||||||||||||| || |||||||||
Sbjct 2614726 AGATCCTTGAGC--AGCCAGGGGTTGACAACTTGGAACTCGCCGGCAAGAACACGACGGG 2614783
Query 65460 CATAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAG 65519
||||||||| || ||| ||| || ||| ||||| | ||| || || || ||
Sbjct 2614784 AATAGATGTTCGAGGTGTAGGGCTCGAAGCATTCATTAAAGCCGAGGATCTGACTGGTGC 2614843
Query 65520 ATGCAGTTGGCATGGGAGCGACCAACAA 65547
||||| ||||| ||||| || | |||
Sbjct 2614844 TCGCAGTGGGCATAGGAGCCACGAGCAA 2614871
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567840103120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |