Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03- 01] 33 sequences; 31,644,316 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq5 87.8 7e-12 >seq5 Length=3167764 Score = 87.8 bits (96), Expect = 7e-12 Identities = 135/191 (71%), Gaps = 4/191 (2%) Strand=Plus/Minus Query 349035 GGTAGACCGACGCATTG--GGCTTCTTCATCTTGGGCGTGGCGTCGAGAATCTCCTTGAG 349092 ||||||||| | || | ||| |||| || |||| | ||| |||||| ||||| || Sbjct 1279421 GGTAGACCGTC--ATCGATGGCGTCTTGATGTTGGTAGCCACGTTGAGAATTTCCTTAAG 1279364 Query 349093 TCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAAGGTCTGGAG 349152 | |||| || || || |||||||||| || || || || ||||| || || | || Sbjct 1279363 ACGAGGCACACCGAGAGTAACGTTCTTGGACGACACACCAGCGAAGTGAAAAGTGTTCAG 1279304 Query 349153 GGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTACCATCTCGCC 349212 |||| |||||| |||||||| ||| | ||| | || || | || ||||||||||| Sbjct 1279303 TGTCATCTGCGTAGCAGGCTCGCCAATGGATTGGGCAGCAAGAACACCGACCATCTCGCC 1279244 Query 349213 GGGCGCGGCAA 349223 || ||||| Sbjct 1279243 TGGGTTGGCAA 1279233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084738297047334