Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03- 01] 76 sequences; 29,468,565 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq57 96.9 1e-14 seq60 95.1 5e-14 >seq57 Length=131118 Score = 96.9 bits (106), Expect = 1e-14 Identities = 129/176 (73%), Gaps = 5/176 (3%) Strand=Plus/Plus Query 349050 TGGGCTTCTTCATCTTG--GGCGTGGCGTCG--AGAATCTCCTTGAGTCTGGGCATGCCC 349105 ||||| |||| | |||| ||| | |||| |||||||| || | || || ||| Sbjct 26644 TGGGCGTCTTGAGCTTGACGGCC-GCCGTCATCAGAATCTCACGCAGACGCGGAATACCC 26702 Query 349106 AGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAAGGTCTGGAGGGTCAACTGCGTG 349165 || |||||||||||||||| | ||| || ||||||||||| | ||| |||| |||||| Sbjct 26703 AGCGTCACGTTCTTGGCCGAGTGGCCAGCCAAGTGGAAGGTGTTGAGCGTCATCTGCGTC 26762 Query 349166 AGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTACCATCTCGCCGGGCGCGGC 349221 ||||| || || ||||||| || | ||||| || |||||||||| |||| Sbjct 26763 GACGGCTCACCAATCGACTGGCCGGCCACAATGCCGACGGCCTCGCCGGGCTCGGC 26818 >seq60 Length=101284 Score = 95.1 bits (104), Expect = 5e-14 Identities = 109/147 (74%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 449006 GTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCGGGCGTCTCGCCGGCCGCG 449065 ||||||||||||||| | | |||||||||||||||||||||||| | ||||| || Sbjct 82531 GTCATGCGCGACGGGAAACCGTGCGGGTTCATGATGATGTCGGGCACCAGCCCGGCGTCG 82590 Query 449066 TTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTCTGGCCGTGGCGG 449125 | || |||| |||||| ||| ||| | | || || ||||| || |||||||| Sbjct 82591 CTAAACGGCAGGTCCTCCTGGTCGACAATGATTCCCACCACACCCTTTTGCCCGTGGCGC 82650 Query 449126 CTGCAGAACTTGTCCCCCTGCTCGGGC 449152 |||| ||||| ||| |||||||| Sbjct 82651 GACGAGAATTTGTCACCCAGCTCGGGC 82677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084737120472648