Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03-
01] 76 sequences; 29,468,565 total letters
Query= NC_027867.1
Length=651523
Score E
Sequences producing significant alignments: (Bits) Value
seq57 96.9 1e-14
seq60 95.1 5e-14
>seq57
Length=131118
Score = 96.9 bits (106), Expect = 1e-14
Identities = 129/176 (73%), Gaps = 5/176 (3%)
Strand=Plus/Plus
Query 349050 TGGGCTTCTTCATCTTG--GGCGTGGCGTCG--AGAATCTCCTTGAGTCTGGGCATGCCC 349105
||||| |||| | |||| ||| | |||| |||||||| || | || || |||
Sbjct 26644 TGGGCGTCTTGAGCTTGACGGCC-GCCGTCATCAGAATCTCACGCAGACGCGGAATACCC 26702
Query 349106 AGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAAGGTCTGGAGGGTCAACTGCGTG 349165
|| |||||||||||||||| | ||| || ||||||||||| | ||| |||| ||||||
Sbjct 26703 AGCGTCACGTTCTTGGCCGAGTGGCCAGCCAAGTGGAAGGTGTTGAGCGTCATCTGCGTC 26762
Query 349166 AGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTACCATCTCGCCGGGCGCGGC 349221
||||| || || ||||||| || | ||||| || |||||||||| ||||
Sbjct 26763 GACGGCTCACCAATCGACTGGCCGGCCACAATGCCGACGGCCTCGCCGGGCTCGGC 26818
>seq60
Length=101284
Score = 95.1 bits (104), Expect = 5e-14
Identities = 109/147 (74%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 449006 GTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCGGGCGTCTCGCCGGCCGCG 449065
||||||||||||||| | | |||||||||||||||||||||||| | ||||| ||
Sbjct 82531 GTCATGCGCGACGGGAAACCGTGCGGGTTCATGATGATGTCGGGCACCAGCCCGGCGTCG 82590
Query 449066 TTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTCTGGCCGTGGCGG 449125
| || |||| |||||| ||| ||| | | || || ||||| || ||||||||
Sbjct 82591 CTAAACGGCAGGTCCTCCTGGTCGACAATGATTCCCACCACACCCTTTTGCCCGTGGCGC 82650
Query 449126 CTGCAGAACTTGTCCCCCTGCTCGGGC 449152
|||| ||||| ||| ||||||||
Sbjct 82651 GACGAGAATTTGTCACCCAGCTCGGGC 82677
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2084737120472648
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |