Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03- 01] 30 sequences; 29,634,442 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq19 363 1e-95 seq18 266 3e-66 >seq19 Length=545716 Score = 363 bits (402), Expect = 1e-95 Identities = 1239/1904 (65%), Gaps = 64/1904 (3%) Strand=Plus/Plus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 || || |||||||| || | |||||||||| || | || ||||||||||| ||| Sbjct 481100 TCAACAGTGAACTGAATGGGCGCCGCAGCCGCCTGCGTACGCAGGTAGTACATGCCCGTC 481159 Query 65138 TTGAGGCC-AGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCT 65195 ||||| || ||| ||| | || ||||| | || |||| |||| | | || | Sbjct 481160 TTGAGACCCAGCTT-CCAGCCCGCAAAGTGCAT-GCTGGTAATCTTGCCCATCGTAGGGT 481217 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255 | || || || || | |||||| ||| ||||| | ||||||||| ||||||| Sbjct 481218 CCTTCATGTGAATGTTGAGCGACTGGGACTGGTCGATAAAGGCACCACGATCAGCAGCCA 481277 Query 65256 TGT---CAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACC 65311 | | ||| |||| | ||| |||||||| || ||||||||||| || | | | Sbjct 481278 TCTGCACAACCGTACGCTG---CGAAATCTCCCACACAGTCTTGTACAG-CGCCTTGATA 481333 Query 65312 TCAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGC 65371 || ||||| ||||| ||||| || || ||||| ||||| || | Sbjct 481334 TCGTCGGGAATGCTGGGAATGTTCTGGATAGATCCGTTCTCCGCAATGATGCGGTTCTTC 481393 Query 65372 ATCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACT 65431 || || ||||||| ||||| || | |||| | | || | | |||| || Sbjct 481394 ATGTTGTCCGACCACAGACCCAGGTCCACCAGATCACGCAGCAGCCAAGGGTTGACAACC 481453 Query 65432 TGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGAT 65491 ||||||||||| | ||| |||||||| || |||||||| ||| || |||||| | Sbjct 481454 TGGAACTCGCCAGCCAGCACACGACGCTGGTAAATGTTGGAAGTGTACGGCTCAAAGCAC 481513 Query 65492 TCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAG 65551 || ||||||| ||||| || | || || || ||||| || || | || | ||| Sbjct 481514 TCGTTGTTGCCCAGAATCTGCGACGTGCTGGCCGTCGGCATCGGCGCAAGCAGAAGCGAG 481573 Query 65552 TTTCGCAATCCGTTCATTTCAATGTTGT----GACGCAATTCGTCCCAGTTCCACATCGG 65607 || |||| |||||| | || | | || || | || |||||| ||| | || Sbjct 481574 TTGCGCACACCGTTCTGCTTGATCTGCTCCTTGA-GCGA--CG-CCCAGTCCCAGA--GG 481627 Query 65608 TTTATCGTCG--ACATCCACGGGCCACATATCCTGTTGCAGGGTTCC----GATACTGGC 65661 | | | || |||| | ||||| || |||||| | || || || ||| Sbjct 481628 TCGCTGGGCGTGACATTC------CACATGTCGAACTGCAGGATGCCCTGAGAAACGGGC 481681 Query 65662 CGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCT-GGTCT 65720 ||||| | || ||| |||||||||||||||| || || | || | Sbjct 481682 ----GAACCCTCATACGTAGAGTAGGTACCCTCCTCCTTGGCAATTTC-CATCGAGGCCG 481736 Query 65721 CGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGC 65780 || || || || ||||| || || || | || || | || ||||| | Sbjct 481737 TCAGGGCAGCGTGGTAGATGGTTTCAAAGATCTGAGTGTTGAGCTTGCGAGCCTCGGCAG 481796 Query 65781 TCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGA 65840 ||| | ||||| | || | | || | || |||||||| ||||| |||| ||| | Sbjct 481797 ACTCAAAAGGCATGCGCAGCGCCAGGAAGGCATCAGCCAGACCCTGAACACCAACACCAA 481856 Query 65841 TGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGA 65900 ||||||| ||||||| ||| |||||||| || ||||||| |||| || | Sbjct 481857 TGGGACGGTGACGCATGTTGCTGTTGTGGGCCTCAGGCACGGGGTAGTGGTTGACGTCAA 481916 Query 65901 TAATGCGATTCAAATTGCGTGTCACCACATGCACGAT-ACGTCG--CAATTGTTCGAAAT 65957 | ||||| |||| ||||| ||| ||| | | | || ||| || | | ||| | Sbjct 481917 TGATGCGGTTCAGGTTGCG---CACAACAACCTTGGTGACCTCGTGCAGCTTCTGGAAGT 481973 Query 65958 CAAAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATG 66017 | | | || || || | | | |||||| || || || || || | Sbjct 481974 CGTACT--------CGTTCT----TGTTGTAGTCGACAAACGACGGCAGAGCCAGCGAAG 482021 Query 66018 CGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGAT 66077 | |||||||| || || | ||| ||||| || ||||| | ||| || |||||||| | Sbjct 482022 CCAGGTTGCACACGGCAACCTCATCAGGCGCACAGTACTCAATAATCTCAGTGCACAGGT 482081 Query 66078 TACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGT 66137 | || ||| ||||| |||| |||| || || |||||||| ||||| ||||||| Sbjct 482082 TGGAGCTGCGGATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGT 482141 Query 66138 ACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGC 66197 ||| |||| |||| |||| ||||| |||| ||| | ||||||| ||| || Sbjct 482142 ACAGCATGAACGGGTTGCCTGTCTCGGTCTGGGCCTCCAGAATGGCGTACCACAGCTTCT 482201 Query 66198 GTGCCTTCACCGTACGTACCGCC-CTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCG 66256 | ||||| | || ||| | ||| | || | | ||||| | |||||| ||| || Sbjct 482202 GGGCCTTGATCG-ACGCGCGGCCACGGCCCTCTTGCTCGTACTTTTCGTACAGGGCCTCA 482260 Query 66257 AAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAA 66316 || || || | || | ||| | || |||| || || |||||||| | ||| Sbjct 482261 AACTCCTCGCCGTAGCAATCAGCCAGGCCAGGGCACTCGTTGGGGCACATCAGGGTCCAG 482320 Query 66317 TCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGA 66376 ||| | | || || ||||| ||| || ||||| || ||||| || || ||| ||| Sbjct 482321 TCAGCGTTCTTCTCGACACGCTTCATGAAGAGATCGGGAATCCACAGCGCCAGGAAAAGA 482380 Query 66377 TCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATG 66436 ||||| || || |||||| ||||||| || ||||||| ||| ||||||||||| | Sbjct 482381 TCGCGGGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAACACA 482440 Query 66437 TCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGG 66496 || || ||||| || |||||||| ||||| || | || || ||| |||||| ||| Sbjct 482441 TCCGCGTGCCACGGCTCCAGGTAAATGGCAAAGGCACCAGGGCGCTTGTTGCCACCCTGG 482500 Query 66497 TCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTG 66556 ||||||||||| || |||||||| ||||||| ||| || | || ||||| || | Sbjct 482501 TCGACGTAGCGGGCAGTGTTGTTGAACACACGCAGCATGGGAATGATACCGTTGGAGGTA 482560 Query 66557 CCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATA 66616 || || |||||| | ||| || || || || || ||| ||||| ||||| ||| Sbjct 482561 CCGTTTGTGCCGGCAATGTACGAGCCAGTGGCACGAATGCGGTGGACATTGAGACCGATA 482620 Query 66617 CCACCGGCCGTCTTCGAGATGGCAGCACAA-TC-GGCCACTGTCCGGAATATGCCGTCAA 66674 ||||| ||| |||| ||||| ||||||| || | | | || | | ||||| || | Sbjct 482621 CCACCAGCCATCTTGGAGATCATAGCACAAGTCTTGAGAGTATC--GTAAATGCCCTCGA 482678 Query 66675 TGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGG 66734 | ||||| |||| ||| | ||| |||| || || || | | ||| || | | Sbjct 482679 TCGAGTCTTCCTTCATGTCAACCAGGAAGCAAGAGGACAGCTGAGCCTGGGGCGTACCCG 482738 Query 66735 CCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCT 66794 | ||| || ||||| | ||||| || ||| | | || ||||||| |||||||||| Sbjct 482739 CGTTGAAAAGAGTGGGCGAGGCGTGGGTGAAGAACTTGCTAGACATGAGGTTGTACGTCT 482798 Query 66795 CGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATT 66854 | || ||| |||| | || || ||| |||| ||| ||||| | | || | Sbjct 482799 CAATAACACGGTCAACTCTGTCACCCCAAATGCCGACAGCAACACGCATAATCATGTGCT 482858 Query 66855 GAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGA 66914 | || || ||||| | | | | || | || | ||| || || ||||||||||||| Sbjct 482859 GGGGACGCTCGACAATCTTGCCGTCGAGCTTCAGCAGGTACGAACGCTCCAGGGTCTTGA 482918 Query 66915 TACCAAAGTACGAGTAATTGAAATCGTTAGCATGCACGATGGCC 66958 ||||||||| ||| ||||| || ||| ||| |||||| Sbjct 482919 AGCCAAAGTACTGGTAGTTGAAGTCACGGTCATACACAATGGCC 482962 >seq18 Length=564976 Score = 266 bits (294), Expect = 3e-66 Identities = 576/851 (68%), Gaps = 12/851 (1%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || || |||||||||| |||||| | ||| || Sbjct 229808 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACGGCCGAGGAGATTGATCTG 229867 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| || | | |||||| | || | | | || | ||| | | ||||| Sbjct 229868 TCCAAGGATCTTCACGACTGGAACAACCGCATGAACAAG-GACGAAAAGTACTTCATCTC 229926 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || || |||| ||||| || ||||||||||| || ||||| ||||| || | || || Sbjct 229927 GCACGTCCTGGCCTTCTTCGCTGCTTCGGACGGCATTGTCAACGAGAACTTGGTCGAGCG 229986 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 |||| || ||||| || | | ||||| || || ||||||||||||||||| || Sbjct 229987 TTTCTCGGGTGAGGTCCAGATCCCCGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGAT 230046 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 |||||| |||||||||||| |||| | |||||||| || ||||||| ||||| || Sbjct 230047 GGAGAACATCCACTCGGAGACGTACTCGCTGCTCATCGACACCTACATCAAGGAGCCTGC 230106 Query 61383 GGAACGTGAACGA-TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGG 61441 | || | | | ||||||| |||||||| || || || | || || || | Sbjct 230107 CCAGCG-CAGCTACCTGTTCAACGCCATCGACACCATTCCTTGCATTCGCCGCAAGGCCG 230165 Query 61442 ATTGGGCCTTCAATTGGATCACC-AGTACAACGGCTACATTTGGTGAACGATTGCTGGCA 61500 | ||||| |||| ||||| || | | | | | || |||| | || || |||| Sbjct 230166 ACTGGGCTCTCAAGTGGATTTCCGACCGCGA-GTCGACCTTTGCCCAGCGTCTGGTGGCC 230224 Query 61501 TTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAG 61560 ||||| | ||||||||| | || ||| || | || ||| | || || ||| || Sbjct 230225 TTTGCCGCCGTCGAGGGTATCTTCTTCTCGGGCGCTTTCGCCTCCATTTTCTGGCTGCGC 230284 Query 61561 AAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGC 61620 || ||||| || ||||||||||||||||| ||| ||| |||| || || |||||||| Sbjct 230285 AAGCGTGGTCTGATGCCCGGTCTGACCTTTTCCAACGAGCTGATTTCGCGTGACGAGGGT 230344 Query 61621 ATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAG 61680 |||| || ||||| |||| ||| ||| | ||| | || || || Sbjct 230345 CTGCACACCGACTTTGCCTGCCTGCTCTTC--TCGC-ACCTGAACACCCGCCCTAGCAAG 230401 Query 61681 GAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGAC 61740 ||| ||| | ||||| | || || || || || |||| || ||||| || Sbjct 230402 AAGCTTGTTGAGGAGATCATCACCGATGCCGTTGTCATTGAGAAGGAGTTCCTGACCGAG 230461 Query 61741 GCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTT 61800 ||| |||| | | || | |||||||| | || ||| |||||| ||||| ||| Sbjct 230462 GCTCTGCCTTGCGCCCTGCTTGGCATGAACGCCGACCTCATGAAGCAGTACATTGAGTTT 230521 Query 61801 GTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCA 61860 || |||||||||||| |||| | | || | || | |||| | | ||||| Sbjct 230522 GTCGCCGACCGTCTGCTGGTTGCCCTTGGCAACGAGAAGGTCTACCGCTCCACGAACCCC 230581 Query 61861 TTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTA 61920 ||||| |||||||| | || ||||||| || ||||| || || |||||||| ||||| Sbjct 230582 TTTGACTTCATGGAGAACATCTCGCTGGGCGGTAAGACCAACTTCTTCGAGAAGCGTGTT 230641 Query 61921 GGCGACTATCA 61931 || ||||| || Sbjct 230642 GGTGACTACCA 230652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567854639200