Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03-
01] 30 sequences; 29,634,442 total letters
Query= NC_027867.1
Length=651523
Score E
Sequences producing significant alignments: (Bits) Value
seq5 89.7 2e-12
>seq5
Length=2148850
Score = 89.7 bits (98), Expect = 2e-12
Identities = 110/148 (74%), Gaps = 2/148 (1%)
Strand=Plus/Plus
Query 449006 GTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCGGGCGTCTCGCCGGCCGCG 449065
||||||||||||||| | | || || |||||||||||||||||| |||||| ||
Sbjct 1769048 GTCATGCGCGACGGGAAACCGTGAGGATTCATGATGATGTCGGGCACTAAGCCGGCATCG 1769107
Query 449066 TTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTCTGGCCGTGGCG- 449124
| || |||| |||||| ||| ||| | | || ||| ||||| || ||||| ||
Sbjct 1769108 CTAAACGGCAAGTCCTCCTGGTCGACAATAATACCAACGACACCCTTTTGTCCGTGACGC 1769167
Query 449125 GCTGCAGAACTTGTCCCCCTGCTCGGGC 449152
| || | |||||||| ||| ||||||||
Sbjct 1769168 GATG-AAAACTTGTCACCCAGCTCGGGC 1769194
Score = 86.0 bits (94), Expect = 3e-11
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 349079 AGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAG 349138
||||| |||||||| | |||| |||||||| |||||||||| | || || ||||||
Sbjct 305663 AGAATTTCCTTGAGACGAGGCACACCCAGGGTAACGTTCTTGGAAGAAACACCAGCAAAG 305604
Query 349139 TGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATG 349198
|||||||| | ||| |||| ||| || |||||| || || | || | || || |
Sbjct 305603 TGGAAGGTGTTGAGCGTCATCTGAGTAGCGGGCTCACCAATCGATTGCGCAGCAAGAACA 305544
Query 349199 CCTACCATCTCGCCGGG 349215
|| |||||||| || ||
Sbjct 305543 CCGACCATCTCACCAGG 305527
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2084738379133940
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |