Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03- 01] 30 sequences; 29,634,442 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq5 89.7 2e-12 >seq5 Length=2148850 Score = 89.7 bits (98), Expect = 2e-12 Identities = 110/148 (74%), Gaps = 2/148 (1%) Strand=Plus/Plus Query 449006 GTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCGGGCGTCTCGCCGGCCGCG 449065 ||||||||||||||| | | || || |||||||||||||||||| |||||| || Sbjct 1769048 GTCATGCGCGACGGGAAACCGTGAGGATTCATGATGATGTCGGGCACTAAGCCGGCATCG 1769107 Query 449066 TTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTCTGGCCGTGGCG- 449124 | || |||| |||||| ||| ||| | | || ||| ||||| || ||||| || Sbjct 1769108 CTAAACGGCAAGTCCTCCTGGTCGACAATAATACCAACGACACCCTTTTGTCCGTGACGC 1769167 Query 449125 GCTGCAGAACTTGTCCCCCTGCTCGGGC 449152 | || | |||||||| ||| |||||||| Sbjct 1769168 GATG-AAAACTTGTCACCCAGCTCGGGC 1769194 Score = 86.0 bits (94), Expect = 3e-11 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 349079 AGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAG 349138 ||||| |||||||| | |||| |||||||| |||||||||| | || || |||||| Sbjct 305663 AGAATTTCCTTGAGACGAGGCACACCCAGGGTAACGTTCTTGGAAGAAACACCAGCAAAG 305604 Query 349139 TGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATG 349198 |||||||| | ||| |||| ||| || |||||| || || | || | || || | Sbjct 305603 TGGAAGGTGTTGAGCGTCATCTGAGTAGCGGGCTCACCAATCGATTGCGCAGCAAGAACA 305544 Query 349199 CCTACCATCTCGCCGGG 349215 || |||||||| || || Sbjct 305543 CCGACCATCTCACCAGG 305527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084738379133940