Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04- 03] 2,315 sequences; 28,117,660 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1790 423 3e-116 >seq1790 Length=4252 Score = 423 bits (468), Expect = 3e-116 Identities = 283/314 (90%), Gaps = 1/314 (0%) Strand=Plus/Plus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 ||||||||||||| |||||| |||| ||| ||||||||||||||||||||||| || ||| Sbjct 257 TGGTCCGGCCGGGTCTTTCCCTCTGTGGAACCGCATGCCCTTCACTGGGTGTGTCGAGGA 316 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 |||||||||||||||||||||||||||||| || | |||||||| |||||||||| Sbjct 317 AACAGGACTTTTACTTTGAAAAAATTAGAGTGCTCCAGGCAGGCCTATGCTCGAATAGTA 376 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 377 CAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 436 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 ||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||| Sbjct 437 AATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAGCTGTCAGAGGTGAAATTCTTGG 496 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 || | ||||||||||||||||||||||| || ||||||||||||||||| || || || Sbjct 497 ATCTGCTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTGATAAG-GA 555 Query 305 ACGAAAGTTAGGGG 318 |||||||||||||| Sbjct 556 ACGAAAGTTAGGGG 569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915178813120