Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04- 03] 2,315 sequences; 28,117,660 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq1617 116 9e-24 >seq1617 Length=165190 Score = 116 bits (128), Expect = 9e-24 Identities = 189/269 (70%), Gaps = 11/269 (4%) Strand=Plus/Plus Query 20 CACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTACGCCAT 79 ||| || | ||||| ||||||| ||| | |||||||| |||||||| ||| Sbjct 122127 CACTGCTAATTCAAGTTCACTGGGTCAATCTTAGAGACAGCTGTTGTATCGTTACATCAT 122186 Query 80 TCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTAC 139 || |||| | | | | ||| | | ||||| ||||||||||||||||||| | | |||| Sbjct 122187 TCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGACCCTCA-CGTTAA 122245 Query 140 GGCCGCCGTTTACCGGGGCTTCGATCAA---GAGCTTCGC----GTTAGCTAACCCCATC 192 ||||||| || ||||||| ||| |||| | ||| | | ||| ||| Sbjct 122246 GGCCGCCATTAACCGGGGGTTCCGTCAACACTAAATTCCCTAAAAAAATTTAATTATATC 122305 Query 193 AATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTT---G 249 |||||| |||||||||||||| | |||||| ||||| | | ||| | ||| | Sbjct 122306 TGTTAACCAGCCGGCACCGGGCAGACATCACACTTTATACTTTGATTTTAATCTTTGACG 122365 Query 250 CAGAGTGCTGTGTTTTTAATAAACAGTCG 278 || ||||||||||||| | |||||||||| Sbjct 122366 CAAAGTGCTGTGTTTTAATTAAACAGTCG 122394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260770812480