Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04- 03] 2,315 sequences; 28,117,660 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq2257 437 1e-120 seq132 437 1e-120 seq565 145 1e-32 >seq2257 Length=1584 Score = 437 bits (484), Expect = 1e-120 Identities = 264/277 (95%), Gaps = 1/277 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| |||||||||||| ||||| | |||||||||||||||||||||||||||||| Sbjct 276 TACTAAGCTGAATTACCATTGCGGCGA-GTTCATCAGTAGGGTAAAACTAACCTGTCTCA 218 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 217 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 158 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 157 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAT 98 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct 97 GAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTATAACCT 38 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACT 277 || || ||||||| |||||||||||||||||||||| Sbjct 37 CAGATCTCGAGGGTTTAAAGGATCGATAGGCCACACT 1 >seq132 Length=988 Score = 437 bits (484), Expect = 1e-120 Identities = 264/277 (95%), Gaps = 1/277 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| |||||||||||| ||||| | |||||||||||||||||||||||||||||| Sbjct 276 TACTAAGCTGAATTACCATTGCGGCGA-GTTCATCAGTAGGGTAAAACTAACCTGTCTCA 218 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 217 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 158 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 157 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAT 98 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct 97 GAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTATAACCT 38 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACT 277 || || ||||||| |||||||||||||||||||||| Sbjct 37 CAGATCTCGAGGGTTTAAAGGATCGATAGGCCACACT 1 >seq565 Length=457 Score = 145 bits (160), Expect = 1e-32 Identities = 89/95 (94%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 201 CCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAG 260 ||||||||||||||||||||||||||||||||| || ||||| || ||||||| ||||| Sbjct 457 CCAGTTATCCCTGTGGTAACTTTTCTGGCACCTATAACCTCAGATCTCGAGGGTTTAAAG 398 Query 261 GATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||||||||||||||||||||||||| Sbjct 397 GATCGATAGGCCACACTTTCATGGTTTGTATTCAC 363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854380220640