Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04-
03] 2,315 sequences; 28,117,660 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq1790 444 2e-122
seq565 435 1e-119
>seq1790
Length=4252
Score = 444 bits (492), Expect = 2e-122
Identities = 264/276 (96%), Gaps = 0/276 (0%)
Strand=Plus/Minus
Query 268 TCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAA 327
|||| | ||| |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 4252 TCACCATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAA 4193
Query 328 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTA 387
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 4192 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATGGTAGATAGGGACAGTGGGAATCTCGTTG 4133
Query 388 ATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCAT 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4132 ATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCAT 4073
Query 448 AGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCAC 507
|||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||
Sbjct 4072 AGTTACTCCCGCCGTTTACCCGCGCTTGTTTGAATTCCATCACTTTGACATTCAGAGCAC 4013
Query 508 TGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
|||||||||||||||||||| ||||| |||||||||
Sbjct 4012 TGGGCAGAAATCACATTGCGCCAACACCACTTTCTG 3977
>seq565
Length=457
Score = 435 bits (482), Expect = 1e-119
Identities = 301/338 (89%), Gaps = 7/338 (2%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 331 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATG 272
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct 271 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGGTC 212
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186
|||||||||||||||||||| |||||| ||| | ||| |||| |||||| |||
Sbjct 211 GGCCCGCGAAGGACCTTAACACCAGAAGTTGGAC--AAAAGTCCAGCCCCGCTT--ATGA 156
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246
||||||||||||| ||||| |||||||||||||||| |||||| |||||||| ||
Sbjct 155 ATAAGTAAAAAAACAATAAGAGTAGTGGTATTTCACTGTTGCCGAA---GCTCCCACCTA 99
Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306
|||||||||||| | ||| |||||| | ||| |||||||||||||||||||||||||||
Sbjct 98 TTCTACACCTCTTATGTCTTTTCACCATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 39
Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTG 344
||||||||||||||| ||||||||||||||||||||||
Sbjct 38 TTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTG 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635162145120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |