Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04-
03] 2,315 sequences; 28,117,660 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq2221 650 0.0
seq1790 172 2e-40
seq1848 125 2e-26
>seq2221
Length=1735
Score = 650 bits (720), Expect = 0.0
Identities = 435/481 (90%), Gaps = 3/481 (1%)
Strand=Plus/Minus
Query 24 CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATT 83
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1735 CATAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATT 1676
Query 84 TGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATC 143
||||||||||||||||||||| | ||||||||| ||||||||||||||||||||| ||
Sbjct 1675 TGCGCGCCTGCTGCCTTCCTTAAAAGTGGTAGCCATTTCTCAGGCTCCCTCTCCGGGGTC 1616
Query 144 GAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAG 203
|| |||||| | ||||||||||||| |||||| | | || | | | |||||||||
Sbjct 1615 GAGCCCTAACCCTCCGTTACCCGTTGTAACCATGCGAAGACAAGACCTTCGCATCGAAAG 1556
Query 204 TTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGT 263
||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 1555 TTGATAGGGAAGAAATTTGAATGAACCATCGCCGGCGCAAGGCCATGCGATTCGAGAAGT 1496
Query 264 TATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCC 323
||| |||||||||| || | |||||| ||| ||||||||| |||||||||||||| |||
Sbjct 1495 TATCATGAATCACC-AGAAAGCCCGAA-GGCATTGGTTTTTAATCTAATAAATACATCCC 1438
Query 324 TTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAG 383
||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1437 TTCGTGAGTCGGGATTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCAAGTAG 1378
Query 384 TAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATA 443
|||||| |||||||||||||||||||| || ||||||||||||||||||||| |||||||
Sbjct 1377 TAAGGTGCTATCAAATAAACGATAACTTATATAATGAGCCATTCGCAGTTTCGCTGTATA 1318
Query 444 GATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCA 503
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1317 -ATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCA 1259
Query 504 G 504
|
Sbjct 1258 G 1258
>seq1790
Length=4252
Score = 172 bits (190), Expect = 2e-40
Identities = 98/100 (98%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 100 GTACTCATTCCGATTACAAGACCCATAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 41
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTT 100
||||||||||||||||||||||||||||||||||||||||
Sbjct 40 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTT 1
>seq1848
Length=3763
Score = 125 bits (138), Expect = 2e-26
Identities = 71/72 (99%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 24 CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATT 83
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3763 CATAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATT 3704
Query 84 TGCGCGCCTGCT 95
||||||||||||
Sbjct 3703 TGCGCGCCTGCT 3692
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510365034240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |