Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04- 03] 2,315 sequences; 28,117,660 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq2221 650 0.0 seq1790 172 2e-40 seq1848 125 2e-26 >seq2221 Length=1735 Score = 650 bits (720), Expect = 0.0 Identities = 435/481 (90%), Gaps = 3/481 (1%) Strand=Plus/Minus Query 24 CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATT 83 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1735 CATAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATT 1676 Query 84 TGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATC 143 ||||||||||||||||||||| | ||||||||| ||||||||||||||||||||| || Sbjct 1675 TGCGCGCCTGCTGCCTTCCTTAAAAGTGGTAGCCATTTCTCAGGCTCCCTCTCCGGGGTC 1616 Query 144 GAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAG 203 || |||||| | ||||||||||||| |||||| | | || | | | ||||||||| Sbjct 1615 GAGCCCTAACCCTCCGTTACCCGTTGTAACCATGCGAAGACAAGACCTTCGCATCGAAAG 1556 Query 204 TTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGT 263 ||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct 1555 TTGATAGGGAAGAAATTTGAATGAACCATCGCCGGCGCAAGGCCATGCGATTCGAGAAGT 1496 Query 264 TATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCC 323 ||| |||||||||| || | |||||| ||| ||||||||| |||||||||||||| ||| Sbjct 1495 TATCATGAATCACC-AGAAAGCCCGAA-GGCATTGGTTTTTAATCTAATAAATACATCCC 1438 Query 324 TTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAG 383 ||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1437 TTCGTGAGTCGGGATTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCAAGTAG 1378 Query 384 TAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATA 443 |||||| |||||||||||||||||||| || ||||||||||||||||||||| ||||||| Sbjct 1377 TAAGGTGCTATCAAATAAACGATAACTTATATAATGAGCCATTCGCAGTTTCGCTGTATA 1318 Query 444 GATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCA 503 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1317 -ATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCA 1259 Query 504 G 504 | Sbjct 1258 G 1258 >seq1790 Length=4252 Score = 172 bits (190), Expect = 2e-40 Identities = 98/100 (98%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 100 GTACTCATTCCGATTACAAGACCCATAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 41 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTT 100 |||||||||||||||||||||||||||||||||||||||| Sbjct 40 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTT 1 >seq1848 Length=3763 Score = 125 bits (138), Expect = 2e-26 Identities = 71/72 (99%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 24 CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATT 83 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3763 CATAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATT 3704 Query 84 TGCGCGCCTGCT 95 |||||||||||| Sbjct 3703 TGCGCGCCTGCT 3692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510365034240