Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04- 03] 2,315 sequences; 28,117,660 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq677 114 5e-20 seq2272 95.1 5e-14 >seq677 Length=56570 Score = 114 bits (126), Expect = 5e-20 Identities = 133/176 (76%), Gaps = 5/176 (3%) Strand=Plus/Minus Query 349050 TGGGCTTCTTCATCTTG--GGCGTGGCGTC--GAGAATCTCCTTGAGTCTGGGCATGCCC 349105 ||||| |||| | |||| ||| | |||| ||||||||| || | || || ||| Sbjct 53584 TGGGCGTCTTGAGCTTGACGGCC-GCCGTCATGAGAATCTCACGCAGGCGCGGGATACCC 53526 Query 349106 AGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAAGGTCTGGAGGGTCAACTGCGTG 349165 || |||||||||||||||| | |||||| ||||||||||| | ||| |||| |||||| Sbjct 53525 AGCGTCACGTTCTTGGCCGAGTGGCCGGCCAAGTGGAAGGTGTTGAGCGTCATCTGCGTC 53466 Query 349166 AGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTACCATCTCGCCGGGCGCGGC 349221 |||||||| || ||||||| || | |||||| || |||||||||| |||| Sbjct 53465 GACGGCTCGCCAATCGACTGGCCAGCCACGATGCCGACGGCCTCGCCGGGCTCGGC 53410 >seq2272 Length=86883 Score = 95.1 bits (104), Expect = 5e-14 Identities = 109/147 (74%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 449006 GTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCGGGCGTCTCGCCGGCCGCG 449065 ||||||||||||||| | | || ||||||||||| ||||||||| | |||||| || Sbjct 66302 GTCATGCGCGACGGGAAACCGTGTGGGTTCATGATTATGTCGGGCACCAGGCCGGCATCG 66243 Query 449066 TTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTCTGGCCGTGGCGG 449125 | || |||| |||||| ||| || | | ||| || ||||| |||||||| || Sbjct 66242 CTAAACGGCAAGTCCTCCTGGTCAACAATGATGCCAACAACACCCTTTTGGCCGTGACGC 66183 Query 449126 CTGCAGAACTTGTCCCCCTGCTCGGGC 449152 |||||||||| ||| |||||||| Sbjct 66182 GACGAGAACTTGTCGCCCAGCTCGGGC 66156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084675856502370