Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04-
03] 2,315 sequences; 28,117,660 total letters
Query= NC_027867.1
Length=651523
Score E
Sequences producing significant alignments: (Bits) Value
seq677 114 5e-20
seq2272 95.1 5e-14
>seq677
Length=56570
Score = 114 bits (126), Expect = 5e-20
Identities = 133/176 (76%), Gaps = 5/176 (3%)
Strand=Plus/Minus
Query 349050 TGGGCTTCTTCATCTTG--GGCGTGGCGTC--GAGAATCTCCTTGAGTCTGGGCATGCCC 349105
||||| |||| | |||| ||| | |||| ||||||||| || | || || |||
Sbjct 53584 TGGGCGTCTTGAGCTTGACGGCC-GCCGTCATGAGAATCTCACGCAGGCGCGGGATACCC 53526
Query 349106 AGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAAGGTCTGGAGGGTCAACTGCGTG 349165
|| |||||||||||||||| | |||||| ||||||||||| | ||| |||| ||||||
Sbjct 53525 AGCGTCACGTTCTTGGCCGAGTGGCCGGCCAAGTGGAAGGTGTTGAGCGTCATCTGCGTC 53466
Query 349166 AGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTACCATCTCGCCGGGCGCGGC 349221
|||||||| || ||||||| || | |||||| || |||||||||| ||||
Sbjct 53465 GACGGCTCGCCAATCGACTGGCCAGCCACGATGCCGACGGCCTCGCCGGGCTCGGC 53410
>seq2272
Length=86883
Score = 95.1 bits (104), Expect = 5e-14
Identities = 109/147 (74%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 449006 GTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCGGGCGTCTCGCCGGCCGCG 449065
||||||||||||||| | | || ||||||||||| ||||||||| | |||||| ||
Sbjct 66302 GTCATGCGCGACGGGAAACCGTGTGGGTTCATGATTATGTCGGGCACCAGGCCGGCATCG 66243
Query 449066 TTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTCTGGCCGTGGCGG 449125
| || |||| |||||| ||| || | | ||| || ||||| |||||||| ||
Sbjct 66242 CTAAACGGCAAGTCCTCCTGGTCAACAATGATGCCAACAACACCCTTTTGGCCGTGACGC 66183
Query 449126 CTGCAGAACTTGTCCCCCTGCTCGGGC 449152
|||||||||| ||| ||||||||
Sbjct 66182 GACGAGAACTTGTCGCCCAGCTCGGGC 66156
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2084675856502370
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |