Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014- 12-05] 26 sequences; 28,476,206 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq16 235 9e-60 >seq16 Length=3495 Score = 235 bits (260), Expect = 9e-60 Identities = 227/283 (80%), Gaps = 15/283 (5%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| ||||||||||||||||||||| |||| |||||| Sbjct 546 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 489 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 488 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 429 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 ||||| |||||| | | || |||| | ||| ||| | |||||||| ||||| | Sbjct 428 GAACGCGGTGATAC-CACCCGCACGT-ATAGATGGACAAGAATAGGCCTCGGCTTAGCGT 371 Query 181 CTTAGCAGGC----CGGCAACGGGCGTCCCGCGGAAGCGCGG-GGCGCTCAGCTGGCGGA 235 |||||||||| | | |||| || |||||| | || | | | | | ||| | Sbjct 370 CTTAGCAGGCGAATCCTCCACGG-----CCACGGAAGAGTGGTTGTGGT-ATTTCGCGTA 317 Query 236 TTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||| ||||||| || | || ||| |||||||||||||||||| Sbjct 316 TTGTAATTTCAACACGAGCGGGGTCAAATCCTTTGCAGACGAC 274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819199793664