Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06-
08] 1,439 sequences; 37,686,724 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq637 269 4e-70
seq928 235 8e-60
seq362 116 6e-24
seq159 73.4 6e-11
>seq637
Length=7549
Score = 269 bits (298), Expect = 4e-70
Identities = 200/229 (87%), Gaps = 5/229 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| ||| |
Sbjct 5983 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGGATT-C 5926
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | | ||| | ||||||
Sbjct 5925 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTAACAAGATT 5866
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||| | ||| ||||||||| || |||| || | | |||||||||||||||||||
Sbjct 5865 ACCCAGGCCTTCCGGCCAAGGGAGTA--CTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 5808
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5807 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 5759
>seq928
Length=1261
Score = 235 bits (260), Expect = 8e-60
Identities = 192/229 (84%), Gaps = 3/229 (1%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| || | |||||| ||||||||| || ||||||| ||| |
Sbjct 500 GTACAAAGGGCAGGGACGTAATCGGCACGAGCT-GATGACTCGTGCCTACTAGGCATT-C 443
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| ||| | ||||||
Sbjct 442 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGGGTTTAACAAGATT 383
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||| |||| |||| |||||||| ||||| || |||||||||||||||||||
Sbjct 382 ACCCAAACCTCTCGGTTAAGGTGATGTACTCGCTGGCCCTGTCAGTGTAGCGCGCGTGCG 323
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct 322 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCGCGCACTTCC 274
>seq362
Length=27520
Score = 116 bits (128), Expect = 6e-24
Identities = 66/67 (99%), Gaps = 0/67 (0%)
Strand=Plus/Plus
Query 162 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 221
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 27392 CAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTCA 27451
Query 222 AACTTCC 228
|||||||
Sbjct 27452 AACTTCC 27458
Score = 77.0 bits (84), Expect = 5e-12
Identities = 44/45 (98%), Gaps = 0/45 (0%)
Strand=Plus/Minus
Query 183 CAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTC 227
|||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 27520 CAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTC 27476
>seq159
Length=77060
Score = 73.4 bits (80), Expect = 6e-11
Identities = 40/40 (100%), Gaps = 0/40 (0%)
Strand=Plus/Plus
Query 189 ATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 40
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751989516885
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |