Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06-
08] 1,439 sequences; 37,686,724 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq637 482 4e-134
seq1131 96.9 6e-18
>seq637
Length=7549
Score = 482 bits (534), Expect = 4e-134
Identities = 296/314 (94%), Gaps = 1/314 (0%)
Strand=Plus/Plus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
|||||||||||||||||||| |||| ||| || |||||||||||||||||||| ||||||
Sbjct 5027 TGGTCCGGCCGGGCCTTTCCCTCTGCGGAACCCCATGCCCTTCACTGGGTGTGGCGGGGA 5086
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
|||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||
Sbjct 5087 AACAGGACTTTTACTTTGAAAAAATTAGAGTGCTCAAGGCAGGCCTATGCTCGAATACAT 5146
Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 5147 TAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 5206
Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244
||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct 5207 AATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 5266
Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304
||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||
Sbjct 5267 ATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAG-GA 5325
Query 305 ACGAAAGTTAGGGG 318
||||||||||||||
Sbjct 5326 ACGAAAGTTAGGGG 5339
>seq1131
Length=324
Score = 96.9 bits (106), Expect = 6e-18
Identities = 61/66 (92%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 253 AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312
||| | ||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||
Sbjct 310 AAGCCCAACTACTGCGAAAGCATTCGCCAAGGATGTTTTCATTAATCAGGGAACGAAAGT 251
Query 313 TAGGGG 318
||||||
Sbjct 250 TAGGGG 245
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915186830272
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |