Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06- 08] 1,439 sequences; 37,686,724 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq839 874 0.0 seq637 697 0.0 >seq839 Length=2147 Score = 874 bits (968), Expect = 0.0 Identities = 595/665 (89%), Gaps = 3/665 (0%) Strand=Plus/Minus Query 20 CCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTA 79 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1925 CCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGTGGTA 1866 Query 80 AATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAA 139 |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1865 AATTTCATCTAAAGCTAAATATTGGCCGGAGACCGATAGCGCACAAGTAGAGTGATCGAA 1806 Query 140 AGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1805 AGATGAAAAGCACTTTGAAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 1746 Query 200 CTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCG-GCCGGTGCACTCTTCTG 258 ||||| |||||||| || ||| | | ||| ||||| ||| ||||||| | | | | Sbjct 1745 CTTGCGACCAGACTCGCTCGCGGG-GTTCAGCCGGCAT-TCGTGCCGGTGTATTTCCCCG 1688 Query 259 CGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTC 318 ||| | ||||||| || | | |||||||||| |||||||| |||| || | ||| | Sbjct 1687 CGGGCGGGCCAGCGTCGGTTTGGGCGGTCGGTCAAAGGCCCTCGGAAGGTAACGCCCCTA 1628 Query 319 GGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGC 378 |||| || |||||||| ||||| |||||| || |||| ||| |||| |||||| |||| Sbjct 1627 GGGGCGTCTTATAGCCGAGGGTGCAATGCGACCTGCCTAGACCGAGGAACGCGCTTCGGC 1568 Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAA 438 | ||| |||||| ||||||| ||||||| ||||||||| ||||||||||||||||||||| Sbjct 1567 TCGGACGCTGGCATAATGGTCGTAAGCGACCCGTCTTGAAACACGGACCAAGGAGTCTAA 1508 Query 439 CATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498 |||||| ||||||||| |||||||||||||||||||| | |||||| ||||||||||||| Sbjct 1507 CATCTACGCGAGTGTTCGGGTGTCAAACCCGTGCGCGAAGTGAAAGCGAACGGAGGTGGG 1448 Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558 ||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1447 AACCCTTACGGGTGCACCATCGACCGATCCTGAAGTCTTCGGATGGATTTGAGTAAGAGC 1388 Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1387 GTAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGCGAAGCCAGAGGAAA 1328 Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678 |||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||| Sbjct 1327 CTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGG 1268 Query 679 GGCGA 683 ||||| Sbjct 1267 GGCGA 1263 >seq637 Length=7549 Score = 697 bits (772), Expect = 0.0 Identities = 551/649 (85%), Gaps = 15/649 (2%) Strand=Plus/Plus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| |||||||||||||||||||||| |||||||||||| |||| |||||||||||| || Sbjct 6910 TGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCAAAATGGGAGGTATAT 6969 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6970 GTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 7029 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 |||||||||| ||| |||||| |||||| || |||||||||||||||||||||||||||| Sbjct 7030 TGAAAAGCACCTTGAAAAGAGGGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTT 7089 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACC-GGCCCCTCGGCCGGTGCACTCTTCTGCGG 261 | |||||||||| ||| | | ||| || || ||| |||||||||| | ||| Sbjct 7090 GTGACCAGACTTGGGCGCGGCGGATCATCCGGGGTTCTC-TCCGGTGCACTTCGCCGCGT 7148 Query 262 TCAGGCCAGCATCAGCTCG-GGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGG 320 ||||||||||||||| ||| |||| ||| |||||| |||||| ||||| || || | Sbjct 7149 TCAGGCCAGCATCAGTTCGTCGCGG-GGGAAAAAGGCTTCGGGAACGTGGCTCC--TCCG 7205 Query 321 GGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGC-CTGGACTGAGGTCCGCGCTCCGGCT 379 || ||||||||||||| | ||| | || || |||||||||| |||||| | || Sbjct 7206 GGAGTGTTATAGCCCGTTGCATAATAC--CCTGCGGTGGACTGAGGACCGCGCATCTGCA 7263 Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439 ||||||||||||||||||| |||| ||||||||| |||||||||||||||||| | Sbjct 7264 AGGATGCTGGCGTAATGGTCACCAGCGACCCGTCTTGAAACACGGACCAAGGAGTC-GTC 7322 Query 440 ATC-TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498 || |||||||||||| ||||||||||||| | ||||||||||||||||||| ||||| | Sbjct 7323 TTCGTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGCAGGTGAG 7382 Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558 | | || ||| ||||||||||||||||||| |||||||||||||||||||||| Sbjct 7383 A----GCTTCGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTTGAGTAAGAGC 7438 Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618 ||| | |||||||||||| ||||||||||||||| ||||||||||||||||||||| Sbjct 7439 ATACGGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTATAGGGTGAAGCCAGAGGAAA 7498 Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAAT 667 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 7499 CTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAAT 7547 Score = 178 bits (196), Expect = 5e-42 Identities = 107/113 (95%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 571 ACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGG 630 |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1 ACCCGAAAGAAGGTGAACTATGCCTGTATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGG 60 Query 631 CTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||||||||||| ||||||||||||||||||||| |||| || ||||||| Sbjct 61 CTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGGGCATGGGGGCGA 113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079969133450