Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06-
08] 1,439 sequences; 37,686,724 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq839 874 0.0
seq637 697 0.0
>seq839
Length=2147
Score = 874 bits (968), Expect = 0.0
Identities = 595/665 (89%), Gaps = 3/665 (0%)
Strand=Plus/Minus
Query 20 CCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTA 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1925 CCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGTGGTA 1866
Query 80 AATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAA 139
|||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1865 AATTTCATCTAAAGCTAAATATTGGCCGGAGACCGATAGCGCACAAGTAGAGTGATCGAA 1806
Query 140 AGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1805 AGATGAAAAGCACTTTGAAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 1746
Query 200 CTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCG-GCCGGTGCACTCTTCTG 258
||||| |||||||| || ||| | | ||| ||||| ||| ||||||| | | | |
Sbjct 1745 CTTGCGACCAGACTCGCTCGCGGG-GTTCAGCCGGCAT-TCGTGCCGGTGTATTTCCCCG 1688
Query 259 CGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTC 318
||| | ||||||| || | | |||||||||| |||||||| |||| || | ||| |
Sbjct 1687 CGGGCGGGCCAGCGTCGGTTTGGGCGGTCGGTCAAAGGCCCTCGGAAGGTAACGCCCCTA 1628
Query 319 GGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGC 378
|||| || |||||||| ||||| |||||| || |||| ||| |||| |||||| ||||
Sbjct 1627 GGGGCGTCTTATAGCCGAGGGTGCAATGCGACCTGCCTAGACCGAGGAACGCGCTTCGGC 1568
Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAA 438
| ||| |||||| ||||||| ||||||| ||||||||| |||||||||||||||||||||
Sbjct 1567 TCGGACGCTGGCATAATGGTCGTAAGCGACCCGTCTTGAAACACGGACCAAGGAGTCTAA 1508
Query 439 CATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498
|||||| ||||||||| |||||||||||||||||||| | |||||| |||||||||||||
Sbjct 1507 CATCTACGCGAGTGTTCGGGTGTCAAACCCGTGCGCGAAGTGAAAGCGAACGGAGGTGGG 1448
Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558
||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1447 AACCCTTACGGGTGCACCATCGACCGATCCTGAAGTCTTCGGATGGATTTGAGTAAGAGC 1388
Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1387 GTAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGCGAAGCCAGAGGAAA 1328
Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678
|||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||
Sbjct 1327 CTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGG 1268
Query 679 GGCGA 683
|||||
Sbjct 1267 GGCGA 1263
>seq637
Length=7549
Score = 697 bits (772), Expect = 0.0
Identities = 551/649 (85%), Gaps = 15/649 (2%)
Strand=Plus/Plus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||| |||||||||||||||||||||| |||||||||||| |||| |||||||||||| ||
Sbjct 6910 TGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCAAAATGGGAGGTATAT 6969
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6970 GTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 7029
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
|||||||||| ||| |||||| |||||| || ||||||||||||||||||||||||||||
Sbjct 7030 TGAAAAGCACCTTGAAAAGAGGGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTT 7089
Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACC-GGCCCCTCGGCCGGTGCACTCTTCTGCGG 261
| |||||||||| ||| | | ||| || || ||| |||||||||| | |||
Sbjct 7090 GTGACCAGACTTGGGCGCGGCGGATCATCCGGGGTTCTC-TCCGGTGCACTTCGCCGCGT 7148
Query 262 TCAGGCCAGCATCAGCTCG-GGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGG 320
||||||||||||||| ||| |||| ||| |||||| |||||| ||||| || || |
Sbjct 7149 TCAGGCCAGCATCAGTTCGTCGCGG-GGGAAAAAGGCTTCGGGAACGTGGCTCC--TCCG 7205
Query 321 GGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGC-CTGGACTGAGGTCCGCGCTCCGGCT 379
|| ||||||||||||| | ||| | || || |||||||||| |||||| | ||
Sbjct 7206 GGAGTGTTATAGCCCGTTGCATAATAC--CCTGCGGTGGACTGAGGACCGCGCATCTGCA 7263
Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439
||||||||||||||||||| |||| ||||||||| |||||||||||||||||| |
Sbjct 7264 AGGATGCTGGCGTAATGGTCACCAGCGACCCGTCTTGAAACACGGACCAAGGAGTC-GTC 7322
Query 440 ATC-TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498
|| |||||||||||| ||||||||||||| | ||||||||||||||||||| ||||| |
Sbjct 7323 TTCGTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGCAGGTGAG 7382
Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558
| | || ||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct 7383 A----GCTTCGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTTGAGTAAGAGC 7438
Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618
||| | |||||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct 7439 ATACGGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTATAGGGTGAAGCCAGAGGAAA 7498
Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAAT 667
||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 7499 CTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAAT 7547
Score = 178 bits (196), Expect = 5e-42
Identities = 107/113 (95%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 571 ACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGG 630
|||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1 ACCCGAAAGAAGGTGAACTATGCCTGTATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGG 60
Query 631 CTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||||||||||| ||||||||||||||||||||| |||| || |||||||
Sbjct 61 CTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGGGCATGGGGGCGA 113
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079969133450
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |