Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06-
08] 1,439 sequences; 37,686,724 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq684 136 1e-29
seq1439 129 1e-27
>seq684
Length=5821
Score = 136 bits (150), Expect = 1e-29
Identities = 199/278 (72%), Gaps = 9/278 (3%)
Strand=Plus/Plus
Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66
|| || | |||| ||| || ||| ||||||||||||| | | |||||||| |
Sbjct 4662 TAAACAGTATCTGCACTGCTATTCCAATTTCACTGAGACAATCATCGAGACAGCTGTTGC 4721
Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126
||||||| | ||||| |||||| | | | ||| | | ||||| |||||||||||||||||
Sbjct 4722 ATCGTTAAGTCATTCATGCAGGACCGCATTTAACGGCCAAGGTATTTCGCTACCTTAGGA 4781
Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAAC 186
|| | || | || ||||||| || | ||||| || |||| | || |||| |||
Sbjct 4782 CCCTCATAGGTAAGGCCGCCATTAATCGGGGTGTCCTTCAAAACCT--CAGTTA-ATAAT 4838
Query 187 C-----CCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCA-CTT 240
| ||| ||| || ||| || |||||| | |||||| | |||| | | ||
Sbjct 4839 CAAGGTAGATCCGTTACCCAGCCGACATTGGGCAGACATCACACTCAATACTTTGATTTT 4898
Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278
| | |||||||||||||||||||||| ||||||||||
Sbjct 4899 TTATCTTTGCAGAGTGCTGTGTTTTTATTAAACAGTCG 4936
>seq1439
Length=29999
Score = 129 bits (142), Expect = 1e-27
Identities = 197/275 (72%), Gaps = 8/275 (3%)
Strand=Plus/Minus
Query 11 CTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCG 70
||| |||| |||||| ||| ||||||||||||||| | |||||||| ||||
Sbjct 3304 CTGTATCTGCACAGCTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGTATCG 3245
Query 71 TTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 130
|||| |||||| |||| | | | | ||| | | ||||| ||||||||||||||||||| |
Sbjct 3244 TTACACCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGACCCT 3185
Query 131 TATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGC---TTCGCGT-TAGCTAAC 186
| |||| ||||||| || ||||||| ||| || | | | | || || ||
Sbjct 3184 CA-CGTTAAGGCCGCCTTTAACCGGGGTTTCCGTCCACATCAAATATTAGTATATTCAAT 3126
Query 187 CCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCA-CTTTCGTG 245
|| |||||| |||||||||||||| |||||| ||||| | | ||| |
Sbjct 3125 TATGTCTGTTAACCAGCCGGCACCGGGCAGATATCACACTTTATACTTAGATTTTTAATC 3066
Query 246 TTT--GCAGAGTGCTGTGTTTTTAATAAACAGTCG 278
||| ||| ||||||||||||| | ||||||||||
Sbjct 3065 TTTCAGCAAAGTGCTGTGTTTTAATTAAACAGTCG 3031
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260781857088
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |