Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06-
08] 1,439 sequences; 37,686,724 total letters
Query= AAMG01000753.1
Length=364
Score E
Sequences producing significant alignments: (Bits) Value
seq1439 86.0 1e-14
seq684 84.2 5e-14
>seq1439
Length=29999
Score = 86.0 bits (94), Expect = 1e-14
Identities = 112/154 (73%), Gaps = 1/154 (1%)
Strand=Plus/Minus
Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68
|||| ||| | ||| ||||||||| ||||| || | ||||||| ||||||||
Sbjct 3300 ATCTGCACAGCTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGTATCGTTAC 3241
Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128
|| ||| ||| | | | | ||| | | ||||| ||||||||||||||||||| | |
Sbjct 3240 ACCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGACCCTCA-C 3182
Query 129 GTTACGGCCGCCGTTTACTGGGGCTTAAGTTCAC 162
|||| ||||||| || || |||| || || |||
Sbjct 3181 GTTAAGGCCGCCTTTAACCGGGGTTTCCGTCCAC 3148
>seq684
Length=5821
Score = 84.2 bits (92), Expect = 5e-14
Identities = 107/147 (73%), Gaps = 8/147 (5%)
Strand=Plus/Plus
Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAG----TGCCCAAATCG 64
|||| ||| | ||| ||||||||| ||| | || | ||||||| ||| ||||
Sbjct 4670 ATCTGCACTGCTATTCCAATTTCACTGAGACAATCATCGAGACAGCTGTTGC----ATCG 4725
Query 65 TTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 124
||| | | ||| ||| || | | | ||| | | ||||| ||||||||||||||||||| |
Sbjct 4726 TTAAGTCATTCATGCAGGACCGCATTTAACGGCCAAGGTATTTCGCTACCTTAGGACCCT 4785
Query 125 TATAGTTACGGCCGCCGTTTACTGGGG 151
|||| || ||||||| || | ||||
Sbjct 4786 CATAGGTAAGGCCGCCATTAATCGGGG 4812
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1062384712064
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |