Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06-
08] 1,439 sequences; 37,686,724 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq637 361 9e-98
seq928 297 3e-78
seq362 129 9e-28
seq159 113 7e-23
seq227 102 1e-19
>seq637
Length=7549
Score = 361 bits (400), Expect = 9e-98
Identities = 238/259 (92%), Gaps = 3/259 (1%)
Strand=Plus/Minus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5841 TACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 5782
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
||||||||||||||||||||||||| |||| || ||| ||||||||||||||||||| ||
Sbjct 5781 ACCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGC 5723
Query 121 CACCAACCATAGTCGATG-GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179
| ||| || | || |||||||||||||||||||||||||||||||||||| ||||
Sbjct 5722 GTACTGCCAAAG-CAATACGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATT 5664
Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239
|| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 5663 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 5604
Query 240 AAAGAGCTATCAATCTGTC 258
|||||||| ||||||||||
Sbjct 5603 AAAGAGCTCTCAATCTGTC 5585
>seq928
Length=1261
Score = 297 bits (328), Expect = 3e-78
Identities = 222/258 (86%), Gaps = 2/258 (1%)
Strand=Plus/Minus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 356 TACTCGCTGGCCCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 297
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
||||||||||||| | |||||||| |||| || ||| |||||||| ||||||||||||
Sbjct 296 ACCTGTTATTGCCGCGCACTTCCATCGGCTTGA-GCCGATAGTCCCCTTAAGAAGCCAGC 238
Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180
|| | | | || |||||||||| || |||||||||||||||||| |||||
Sbjct 237 GGCCCGCAAATGCGGACCGGGCTATTTAAG-GGCCGAGGTCTCGTTCGTTATCGCAATTA 179
Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240
| ||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||
Sbjct 178 AGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCATCCAAAAGATCAAGA 119
Query 241 AAGAGCTATCAATCTGTC 258
||||||| ||||||||||
Sbjct 118 AAGAGCTCTCAATCTGTC 101
>seq362
Length=27520
Score = 129 bits (142), Expect = 9e-28
Identities = 81/86 (94%), Gaps = 1/86 (1%)
Strand=Plus/Plus
Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 27392 CAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTCA 27451
Query 77 AACTTCCATTGGCTGGAAGCCAATAG 102
||||||||| |||| | |||| ||||
Sbjct 27452 AACTTCCATCGGCTTG-AGCCGATAG 27476
Score = 84.2 bits (92), Expect = 3e-14
Identities = 57/63 (90%), Gaps = 1/63 (2%)
Strand=Plus/Minus
Query 38 CAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCC 97
|||||| |||||||||||||||||||||||||||||||||||||| || |||| |||||
Sbjct 27520 CAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCTATCGGCT-CAAGCC 27462
Query 98 AAT 100
||
Sbjct 27461 GAT 27459
>seq159
Length=77060
Score = 113 bits (124), Expect = 7e-23
Identities = 72/77 (94%), Gaps = 1/77 (1%)
Strand=Plus/Plus
Query 44 ATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGT 103
|||||||||||||||||||||||||||||||||||||||||| |||| | |||| |||||
Sbjct 1 ATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATCGGCTTG-AGCCGATAGT 59
Query 104 CCCTCTAAGAAGCCAGC 120
|||||||||||||| ||
Sbjct 60 CCCTCTAAGAAGCCGGC 76
>seq227
Length=51345
Score = 102 bits (112), Expect = 1e-19
Identities = 95/121 (79%), Gaps = 6/121 (5%)
Strand=Plus/Plus
Query 143 TATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAA 202
|| |||||||| | ||||||||| |||||| |||| ||||||| | ||||| |||
Sbjct 24503 TACTTAGCAGGCCAGGGTCTCGTTTTTTATCGCGGTTAAGCAGACAATTTACTCCGCCAG 24562
Query 203 CTAAGAACGGCCATG------CACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTG 256
|||||| | |||||| |||||||||||| | ||||||||||||||| ||||| ||
Sbjct 24563 CTAAGAGCAGCCATGCACCACCACCACCACCCACAAAATCAAGAAAGAGCTTTCAATATG 24622
Query 257 T 257
|
Sbjct 24623 T 24623
Score = 82.4 bits (90), Expect = 1e-13
Identities = 54/60 (90%), Gaps = 0/60 (0%)
Strand=Plus/Plus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| |||||||||||||| |||||||| ||||||||||| |||||||| ||||| ||
Sbjct 24427 TACTCGCTGGCTCCGTCAGTGCAGCGCGCGAGCGGCCCAGAATATCTAAGGACATCAAAG 24486
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796788892359
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |