Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06- 08] 1,439 sequences; 37,686,724 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq637 488 9e-136 seq760 194 3e-47 seq161 100 5e-19 >seq637 Length=7549 Score = 488 bits (540), Expect = 9e-136 Identities = 286/295 (97%), Gaps = 1/295 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| ||||||||||| || || |||||||||||||||||||||||||||||||| Sbjct 2198 TACTAAGCTCAATTACCATTGCGGTGA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCA 2140 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2139 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 2080 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 2079 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAT 2020 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2019 GAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 1960 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1959 CAAATGTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 1905 >seq760 Length=3755 Score = 194 bits (214), Expect = 3e-47 Identities = 119/127 (94%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||| |||||||| ||| |||||| |||||||||||||||||||||||||||||| Sbjct 127 TACTAAATTGAATTACCGTTGCGGCGACCTTCATCAGTAGGGTAAAACTAACCTGTCTCA 68 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 67 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 8 Query 121 ATTCTGC 127 ||||||| Sbjct 7 ATTCTGC 1 >seq161 Length=76449 Score = 100 bits (110), Expect = 5e-19 Identities = 111/148 (75%), Gaps = 10/148 (7%) Strand=Plus/Minus Query 76 AGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTAT 135 ||| ||| ||| ||||||| ||||||| |||| |||| |||||| |||| | |||| Sbjct 4710 AGCCCACATTCTCTATTAG-----GAACAATTCAACACTTAGCGAATTTTGCTACTGTAT 4656 Query 136 GATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCC 195 ||| ||||| |||||| || ||| || | ||| |||||||||||||| || Sbjct 4655 GATTTGAAGATGTGACATC-----ATGAAAGAGTGGCATCGTTATGAACGCTTGGCCACC 4601 Query 196 ACAAGCCAGTTATCCCTGTGGTAACTTT 223 |||||||| ||||| ||||||| || || Sbjct 4600 ACAAGCCAATTATCTCTGTGGTTACGTT 4573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854387705184