Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06-
08] 1,439 sequences; 37,686,724 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq637 100 2e-19
seq928 93.3 3e-17
>seq637
Length=7549
Score = 100 bits (110), Expect = 2e-19
Identities = 70/76 (92%), Gaps = 3/76 (4%)
Strand=Plus/Minus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||| ||||||| || ||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 6023 CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 5966
Query 109 TAATACAACGCAAGCT 124
|||| |||||||||||
Sbjct 5965 TAAT-CAACGCAAGCT 5951
>seq928
Length=1261
Score = 93.3 bits (102), Expect = 3e-17
Identities = 72/82 (88%), Gaps = 4/82 (5%)
Strand=Plus/Minus
Query 31 AAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGT 90
|||||||| || ||| |||||| ||||||| || ||||||||| ||||||||||| ||
Sbjct 556 AAGCCAATCCC--AAGGCCTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGT 501
Query 91 GTACAAAGGGCAGGGACGTAAT 112
||||||||||||||||||||||
Sbjct 500 GTACAAAGGGCAGGGACGTAAT 479
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300795942020
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |