Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06- 08] 1,439 sequences; 37,686,724 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq637 100 2e-19 seq928 93.3 3e-17 >seq637 Length=7549 Score = 100 bits (110), Expect = 2e-19 Identities = 70/76 (92%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||| ||||||| || ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 6023 CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 5966 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 5965 TAAT-CAACGCAAGCT 5951 >seq928 Length=1261 Score = 93.3 bits (102), Expect = 3e-17 Identities = 72/82 (88%), Gaps = 4/82 (5%) Strand=Plus/Minus Query 31 AAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGT 90 |||||||| || ||| |||||| ||||||| || ||||||||| ||||||||||| || Sbjct 556 AAGCCAATCCC--AAGGCCTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGT 501 Query 91 GTACAAAGGGCAGGGACGTAAT 112 |||||||||||||||||||||| Sbjct 500 GTACAAAGGGCAGGGACGTAAT 479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300795942020