Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06- 08] 1,439 sequences; 37,686,724 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq637 163 3e-38 >seq637 Length=7549 Score = 163 bits (180), Expect = 3e-38 Identities = 155/193 (80%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 5197 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 5138 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || || |||||| |||| |||||||||||| |||| |||||||||||| |||| | || Sbjct 5137 AGCATAGGCCTGCCTTGAGCACTCTAATTTTTTCAAAGTAAAAGTCCTGTTTCCCCGCCA 5078 Query 126 CA-CCAATGAA-GGCATACGGGCTCACCA-AGAGGTAGGGCTGGGTAATGCAGTACTCGC 182 || ||| |||| ||||| ||| || || || | ||| | || |||| | ||| Sbjct 5077 CACCCAGTGAAGGGCAT-GGGGTTCCGCAGAGGGAAAGGCCCGGCCGGACCAGTGCACGC 5019 Query 183 CGTGAGGCGGACC 195 |||||||||||| Sbjct 5018 GGTGAGGCGGACC 5006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595191702726