Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06- 08] 1,439 sequences; 37,686,724 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq532 84.2 5e-14 >seq532 Length=11969 Score = 84.2 bits (92), Expect = 5e-14 Identities = 109/151 (72%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 189 GAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCG 248 ||||| || | |||| | | |||| | |||| ||||||| || |||||||||| Sbjct 8628 GAATTTCTGGAGTAGAGATAAAATTTGATGATACCAGGAGGACTGTCAACGGCGAAGGCG 8687 Query 249 GCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGAT 308 | | || |||||||| |||| |||| || |||| ||||||||||||||||| Sbjct 8688 TCCTTCTATGTAATAACTGACGTTGAGAGACGAAGGCTTGGGTAGCAAACAGGATTAGAT 8747 Query 309 ACCCTGGTAGTCCACGCCGTAAACGATGAAT 339 ||||| ||||||| || | || ||||||| Sbjct 8748 ACCCTAATAGTCCAAGCAGACAATGATGAAT 8778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203182685952