Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06-
08] 1,439 sequences; 37,686,724 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq637 455 6e-126
seq928 401 1e-109
seq362 149 1e-33
seq159 138 2e-30
seq227 100 5e-19
>seq637
Length=7549
Score = 455 bits (504), Expect = 6e-126
Identities = 288/309 (93%), Gaps = 2/309 (1%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||||||||||| | |||||||| | ||||||||||||||
Sbjct 5676 GAACGAGACCTTAACCTGCTAAATAGCCCGTATTGCTTTGGCAGTACGCCGGCTTCTTAG 5735
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5736 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 5795
Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199
|||||||||||||||||||||||||||||||| |||||| ||||| | || |||||||||
Sbjct 5796 GATGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTAC-TC-CCTTGGCCG 5853
Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259
||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 5854 GAAGGCCTGGGTAATCTTGTTAAACTCCGTCGTGCTGGGGATAGAGCATTGCAATTATTG 5913
Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319
|||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||
Sbjct 5914 CTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTG 5973
Query 320 CCCTTTGTA 328
|||||||||
Sbjct 5974 CCCTTTGTA 5982
>seq928
Length=1261
Score = 401 bits (444), Expect = 1e-109
Identities = 263/290 (91%), Gaps = 0/290 (0%)
Strand=Plus/Plus
Query 39 TAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGACTATCGGCTCAAGC 98
||||||||| || |||| || ||||| ||| ||||||||| ||||||||||||||||||
Sbjct 210 TAAATAGCCCGGTCCGCATTTGCGGGCCGCTGGCTTCTTAAGGGGACTATCGGCTCAAGC 269
Query 99 CGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGC 158
|||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 270 CGATGGAAGTGCGCGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGC 329
Query 159 GCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTG 218
||||||||||||||| |||| ||||| ||||||||| ||| |||| ||||||||||||
Sbjct 330 GCGCTACACTGACAGGGCCAGCGAGTACATCACCTTAACCGAGAGGTTTGGGTAATCTTG 389
Query 219 TTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCC 278
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 390 TTAAACCCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCC 449
Query 279 TAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
||||| || || ||||||||| || | ||||||||||||||||||||||
Sbjct 450 TAGTAGGCACGAGTCATCAGCTCGTGCCGATTACGTCCCTGCCCTTTGTA 499
>seq362
Length=27520
Score = 149 bits (164), Expect = 1e-33
Identities = 84/85 (99%), Gaps = 0/85 (0%)
Strand=Plus/Minus
Query 85 CTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGT 144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 27476 CTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGACGT 27417
Query 145 TCTGGGCCGCACGCGCGCTACACTG 169
|||||||||||||||||||||||||
Sbjct 27416 TCTGGGCCGCACGCGCGCTACACTG 27392
Score = 95.1 bits (104), Expect = 2e-17
Identities = 58/62 (94%), Gaps = 0/62 (0%)
Strand=Plus/Plus
Query 87 ATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTC 146
||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct 27459 ATCGGCTTGAGCCGATAGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGACGTTC 27518
Query 147 TG 148
||
Sbjct 27519 TG 27520
>seq159
Length=77060
Score = 138 bits (152), Expect = 2e-30
Identities = 76/76 (100%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 67 GCCGGCTTCTTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTC 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 76 GCCGGCTTCTTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTC 17
Query 127 TGTGATGCCCTTAGAT 142
||||||||||||||||
Sbjct 16 TGTGATGCCCTTAGAT 1
>seq227
Length=51345
Score = 100 bits (110), Expect = 5e-19
Identities = 82/97 (85%), Gaps = 2/97 (2%)
Strand=Plus/Minus
Query 126 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTT 185
|| ||||| |||||||| ||||||||||| |||||||| ||||||| |||||| |||||
Sbjct 24486 CTTTGATGTCCTTAGATATTCTGGGCCGCTCGCGCGCTGCACTGACGGAGCCAGCGAGTA 24427
Query 186 CATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAA 222
| || |||||||| |||| || | ||||||||||||
Sbjct 24426 C-TC-CCTTGGCCTCAAGGCCTTGATAATCTTGTTAA 24392
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947186369792
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |