Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06- 08] 1,439 sequences; 37,686,724 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq760 277 3e-72 seq637 235 9e-60 >seq760 Length=3755 Score = 277 bits (306), Expect = 3e-72 Identities = 236/283 (83%), Gaps = 10/283 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||| Sbjct 125 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 182 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct 183 GCCGCGACGCTACCATCTGCCGGATTATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 242 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTC-GGCCCCGA 178 ||||| || |||| || |||| ||||||| ||||||||||||| |||| |||| | Sbjct 243 GAACGCGGCGATTTCGCCCCGCACGTCGTAGTTGGATACGAATAGGCCTTCGGGCCATGC 302 Query 179 ACCTTAGCAGGCCGGCAACGGGCGTCCCGCGG---AAGCGCGGGGCGCTCAGCTGGCGGA 235 |||| ||||||| ||| |||| ||||| || || | ||| ||| ||| ||||| Sbjct 303 ACCTCAGCAGGCTGGCGACGG--CTCCCGGGGAGAAACCCTCGGGAGCT-GGCTAGCGGA 359 Query 236 TTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||| ||| ||||| |||| |||||| ||||| |||||||||| Sbjct 360 TTGTAATGTCACCTCGCGCGGGGATAGATCCTCTGCAGACGAC 402 >seq637 Length=7549 Score = 235 bits (260), Expect = 9e-60 Identities = 225/279 (81%), Gaps = 8/279 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| ||||||||||||||||||||| |||| |||||| Sbjct 2196 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 2253 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 2254 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 2313 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 ||||| ||||| | | || |||| | ||| |||| | |||||||||||||| | Sbjct 2314 GAACGCGGTGA-TAGCACCCGCACGT-ATAGACGGACAAGAATAGGCTTCGGCTTAGTGT 2371 Query 181 CTTAGCAGGC-CGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239 || ||||||| | | | |||| |||||| | ||| | | | ||| |||| Sbjct 2372 CTCAGCAGGCGATTCCTCCGTGGTCC--TCGAAGCGGGCCGCGGT-ATTTCGCGTATTGT 2428 Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||||| || | || ||| ||||||||||||||||||| Sbjct 2429 AATTTCAACACGAGCGGGGTTAAATCCTTTGCAGACGAC 2467 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819188580096