Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06-
08] 1,439 sequences; 37,686,724 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq760 277 3e-72
seq637 235 9e-60
>seq760
Length=3755
Score = 277 bits (306), Expect = 3e-72
Identities = 236/283 (83%), Gaps = 10/283 (4%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||
Sbjct 125 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 182
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct 183 GCCGCGACGCTACCATCTGCCGGATTATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 242
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTC-GGCCCCGA 178
||||| || |||| || |||| ||||||| ||||||||||||| |||| |||| |
Sbjct 243 GAACGCGGCGATTTCGCCCCGCACGTCGTAGTTGGATACGAATAGGCCTTCGGGCCATGC 302
Query 179 ACCTTAGCAGGCCGGCAACGGGCGTCCCGCGG---AAGCGCGGGGCGCTCAGCTGGCGGA 235
|||| ||||||| ||| |||| ||||| || || | ||| ||| ||| |||||
Sbjct 303 ACCTCAGCAGGCTGGCGACGG--CTCCCGGGGAGAAACCCTCGGGAGCT-GGCTAGCGGA 359
Query 236 TTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||| ||| ||||| |||| |||||| ||||| ||||||||||
Sbjct 360 TTGTAATGTCACCTCGCGCGGGGATAGATCCTCTGCAGACGAC 402
>seq637
Length=7549
Score = 235 bits (260), Expect = 9e-60
Identities = 225/279 (81%), Gaps = 8/279 (3%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| ||||||||||||||||||||| |||| ||||||
Sbjct 2196 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 2253
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2254 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 2313
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||| ||||| | | || |||| | ||| |||| | |||||||||||||| |
Sbjct 2314 GAACGCGGTGA-TAGCACCCGCACGT-ATAGACGGACAAGAATAGGCTTCGGCTTAGTGT 2371
Query 181 CTTAGCAGGC-CGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239
|| ||||||| | | | |||| |||||| | ||| | | | ||| ||||
Sbjct 2372 CTCAGCAGGCGATTCCTCCGTGGTCC--TCGAAGCGGGCCGCGGT-ATTTCGCGTATTGT 2428
Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||||| || | || ||| |||||||||||||||||||
Sbjct 2429 AATTTCAACACGAGCGGGGTTAAATCCTTTGCAGACGAC 2467
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819188580096
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |