Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06- 08] 1,439 sequences; 37,686,724 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq135 275 5e-69 seq219 268 7e-67 >seq135 Length=88816 Score = 275 bits (304), Expect = 5e-69 Identities = 1215/1893 (64%), Gaps = 78/1893 (4%) Strand=Plus/Plus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 |||||| ||||||||||| | ||| || |||| ||| | || ||||||||||| || Sbjct 28565 ATCGACTGTGAACTGGATAGGTGCAGCCGCGGCCTGGGTACGCAGGTAGTACATGCCAGT 28624 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCT 65195 |||||| ||| ||| || ||||||||| | || |||| |||| | | | || | Sbjct 28625 CTTGAGACCAAGCTTCCAGCCAGTGAAATGCAT-GCTGGTAATCTTGCCCATTGTGGGAT 28683 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255 | || || || ||||| ||||| |||||| ||| || |||||| || || | || Sbjct 28684 CCTTCATGTGGATGTTCAAGGACTGGGACTGATCAATGAAAGCACCACGGTCGGCTGACA 28743 Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCA 65314 | | | || ||||| || |||||||| || |||||||||||| | | | | || Sbjct 28744 TCTGGACAATTTGACGTTGAGAAATCTCCCAAACAGTCTTGTACAGG-GCCTTGATGTCG 28802 Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATC 65374 ||||| | ||||| ||||| || || ||||| ||||| || ||| Sbjct 28803 GCGGGAATGTTGGGAATGTTCTGGATAGAGCCGTTCTCAGCAATGATGCGGTTCTTCATA 28862 Query 65375 GACTCTGACCACAAACCCAAATCGATAAGATG-TTGAACCAAGTGACGA-TTGATGACTT 65432 | || ||||| | || ||||| ||||| |||| ||| | | |||| || | Sbjct 28863 GCATCGGACCAAAGGCCGGTATCGACAAGATCCTTGAG--AAGCCAGGGGTTGACAACCT 28920 Query 65433 GGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATT 65492 |||||||||| | || ||||| || ||||||||||| ||| ||| ||||| | | Sbjct 28921 GGAACTCGCCAGCAAGGACACGTCGCTGGTAGATGTTGGAGGTGTAGGGCTCAAAACACT 28980 Query 65493 CAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGT 65552 | |||| || | || |||| ||| ||||| ||||| || ||||| | ||| || Sbjct 28981 CGTTGTTACCCAAGATCTGGGAAGTGCTGGCAGTGGGCATAGGGGCGACGAGCAAGCTGT 29040 Query 65553 TTCGCAATCCGTTCATTTCAATGTTG-----TGACGCAATTCGTCCCAGTTCCACATCGG 65607 | || | |||| | | ||| ||| ||| ||| |||| | ||||| || Sbjct 29041 TGCGAAGACCGTGCTCCTTAAT-TTGCTCCTTGAGCGAAT----CCCACTCCCACA--GG 29093 Query 65608 TTTATCGTC--GACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGT 65665 | | | | ||||||| ||||| || | ||| || | || | ||| ||| Sbjct 29094 TCGGTGGGCTTGACATCC------CACATGTCATATTGAAGAATGCCTTCAGAGGCGGGT 29147 Query 65666 GAACCGAGGAAACTATCGTACACT--CCCTCCTCCTTGGCAAGTTG-ACAGCTGGTCTCG 65722 || || ||| | || | | || || ||||||||| | | || || ||| Sbjct 29148 GATCCCTTGAA--TGACGAATAAGGACCTTCAACCTTGGCAATCTCCATAGA-GGCCTCA 29204 Query 65723 AGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTC 65782 || || ||| || |||||||| || || | || || ||||| || || Sbjct 29205 AGGGCAGCATGGTAGATGGTCTCAAAGATTTGCTTGTTCAGCTCACGAGCTTCGGGTGAT 29264 Query 65783 TCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATG 65842 ||| | || | || || | |||| || || || || || || |||| ||| ||| Sbjct 29265 TCGAAGGGAAGACGCAGAGCAAGGAAAGCATCAGCAAGTCCCTGGACACCAACACCAATG 29324 Query 65843 GGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATA 65902 || || ||||| ||| | ||||| | ||||||||||| || | |||||| Sbjct 29325 GGTCGGTGACGGCTGTTGCTGTTGCGAGCCTCCTGAACAGGGTAGTAGTTCACATCGATG 29384 Query 65903 ATGCGATTCAAATTGCGTGTCACCACATGCACGA-TACGTCGCAATTGTTCGAAATCAAA 65961 ||||| || | || || ||||| | | | ||| | | | || || ||| | Sbjct 29385 ATGCGGTTGAGGTTACGGACAACCACCTTTGTAACTTCGT-GAAGCTTTTTAAAGTCATA 29443 Query 65962 --ATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCG 66019 || || || | | ||| |||| ||| |||| | ||| ||| || Sbjct 29444 GCATCCTT----CGTT--GTAGTC---GACA----AAAGCAGGGAGAGCCAA-AGAGGCC 29489 Query 66020 AGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTA 66079 | |||||||||||| | ||| ||||| || | ||||| | ||| || ||||| || || Sbjct 29490 AAGTTGCAGACAGCGACCTCATCAGGCGCAGAGTACTCAATAATCTCAGTGCAGAGGTTG 29549 Query 66080 CTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTAC 66139 || ||| ||||| |||| |||| || || |||||||| ||||| ||||||||| Sbjct 29550 GAGCTGCGGATGGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGCTATCCTTGTAG 29609 Query 66140 ATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAG------A 66193 | |||| | || | || |||||| |||| ||| | ||| | || ||| || | Sbjct 29610 AGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCCAGGATAGAGTACCACAGCTTCTGA 29669 Query 66194 GCGCGT---GCCTTC--ACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGA 66248 || || | ||| ||| |||| |||| |||| || || | || || | Sbjct 29670 GCTCGGATAGTCTTGCGACC--ACGT----CCCT-CCTTC----TCATACTTCTCATACA 29718 Query 66249 GGTGTTCGAAGGATTCACCCCATACT--TCGGACAGACATGGACACTTGTGTGGACACAT 66306 | ||||| | | | ||||| || | || | || || | | || ||||| Sbjct 29719 GAGCCTCGAAT--TCCTCGCCATAGCAGTCAGCAAGGCCAGGGCATTCATTAGGGCACAT 29776 Query 66307 CAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGC 66366 || | |||||| | || || || || ||| || |||||||| |||||||| || Sbjct 29777 CAAAGTCCAATCCAAGTTCTTCTCGACGCGCTTCATGAACAGATCAGGGATCCAGAGAGC 29836 Query 66367 GTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAA 66426 | ||| || || || || || ||| || ||||||| || ||||| | ||| ||||| Sbjct 29837 GAGGAACAGGTCACGGGCACGGACCTCTTCCTTGCCGTGGTTCTTGCGGAGGTCAAGGAA 29896 Query 66427 CTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCC 66486 |||||||| ||||| ||||| || || ||||||||||| || | || ||| ||| Sbjct 29897 CTCAAAGACATCGGCGTGCCAAGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGTT 29956 Query 66487 GCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCC 66546 ||||| ||||||||||| | || |||||||||||||| | ||| || | || || Sbjct 29957 TCCACCCTGGTCGACGTATCTGGCAGTGTTGTTGAAGACACGAAGCATGGGGATGATACC 30016 Query 66547 GTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATT 66606 ||| || | || || |||||| |||| || ||| || || ||| ||| || || Sbjct 30017 GTTGGAGGTACCGTTTGTGCCGGCGATATAAGAGCCTGTGGCACGGATACGGTGGACGTT 30076 Query 66607 CAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATAT 66666 || || |||||||| ||| |||| || || ||||| || || | | || Sbjct 30077 GAGGCCGATACCACCAGCCATCTTGGAAATCATGGCACATGTCTTCAAAGTATCGTAGAT 30136 Query 66667 GCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGG 66726 || |||||| ||| |||| ||| | | | ||||||| || || | || || Sbjct 30137 ACCCTCAATGCTGTCGTCCTTCATGTCAACCAAGAAGCATGAGGAGAGCTGAGCTTGCGG 30196 Query 66727 TGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATT 66786 || | || |||||||||||| | || || |||||| | | || |||||| | Sbjct 30197 GGTACCAGCGTTGAAGAGGGTGGGGGACGCATGGGTAAAGAATTTGCTGGACATGAGGTG 30256 Query 66787 GTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAG 66846 ||| ||||| | |||| |||||||| || || ||| || | || |||||| | Sbjct 30257 GTATGTCTCAAGGACACGCTCAATGTTGTCTCCCCAAATGCCAACAGCCACTCGCATAAT 30316 Query 66847 GAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAG 66906 | || || ||||| || || | | | | | | || | || || || ||||| Sbjct 30317 CATGTGCTGTGGCCGCTCAACAATCTTGCCATCAAGCTTCAGGAGATATGATCGCTCCAG 30376 Query 66907 GGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939 |||||||| || ||||| ||| ||||| || Sbjct 30377 GGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTC 30409 >seq219 Length=54288 Score = 268 bits (296), Expect = 7e-67 Identities = 586/858 (68%), Gaps = 26/858 (3%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || |||||||||||||| | |||||| | ||| || Sbjct 43315 ATCTGGCAAATGTACAAGAAGGCTGAGGCTTCCTTCTGGACCGCCGAGGAGATTGATCTG 43256 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTT-ATCGA-GCGGTGAACAACATTTCATTA 61201 ||||| || || | |||||| | || | | ||| | | ||| || ||||| Sbjct 43255 TCCAAGGATTTGCACGACTGGAACAACCGCCTGAACGATGACGAGAAGTAC--TTCATCT 43198 Query 61202 AACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAAC 61261 || | |||| |||||||| || |||||||| || ||||| ||||| | | || | Sbjct 43197 CTCACATCCTGGCCTTCTTTGCTGCCTCGGACGGCATTGTCAACGAGAACCTGGTCGAGC 43138 Query 61262 GTTTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCC 61320 ||||| || | ||||| || | | ||||| || || |||||||| |||||||| Sbjct 43137 GTTTCA-GCGGCGAGGTTCAGATCCCCGAGGCTCGATGCTTCTACGGTTTCCAGATCATG 43079 Query 61321 ATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGG 61380 |||||||| ||||||| |||| ||| | | |||||||| || ||| ||| ||||| Sbjct 43078 ATGGAGAACATCCACTCCGAGACATACTCTCTGCTCATCGACACCTACGTCAAGGAGCAC 43019 Query 61381 GCGGAACGTGAACGAT-TGTTCAATGCCATCGAGACGATACCG-GCGGTGAAGCG-GAAA 61437 | || | | | | ||||| || || ||||| || || || | || ||| Sbjct 43018 AGCCAGCGC-ACCTACCTCTTCAACGCTATTGAGACTATCCCTTGCATTC--GCAAGAAG 42962 Query 61438 GCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTA--CATTTGGTGAACGATTGC 61495 || || |||||| |||| |||||| ||| |||| || | |||| | || | Sbjct 42961 GCCGAGTGGGCCATCAAGTGGATC--CAGGACAAGAACTCTTCCTTTGCCCAGCGTCTCG 42904 Query 61496 TGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGT 61555 | || ||||| | || |||||| | || ||||| ||| | |||||| | ||||| ||| Sbjct 42903 TTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGCGGAGCCTTTGCCTCCATCTTCTGGC 42844 Query 61556 TGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACG 61615 | ||||| | || || ||||| |||||||||||| ||| ||| | || || || |||| Sbjct 42843 TCAAGAAGAGAGGTCTCATGCCTGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGACG 42784 Query 61616 AGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGT 61675 |||| |||| ||| |||||| |||| || | | | ||| ||| || || Sbjct 42783 AGGGTCTGCACACTGACTTTGCTTGCCTGCTC--CACTCTC-ACCTGAAGAACCG--CGC 42729 Query 61676 CGG--AGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCT 61733 | | ||||| | | |||| || | ||| || || | ||||| ||||| || | Sbjct 42728 CAGCAAGGAGATTATCCGTGACATCATCACTGATGCCGTCAGAATCGAGCAGGAGTTCTT 42669 Query 61734 GACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATAT 61793 |||||| ||| | || | | || | |||||||| || ||| |||||| || Sbjct 42668 GACTGAGGCTCTCCCTTGCGCTCTTCTGGGCATGAACGCCAACCTGATGAAGCAGTACAT 42609 Query 61794 TGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAA 61853 ||| ||||||||||| |||||| | |||| | | || | || |||||| || | Sbjct 42608 TGAGTTTGTTGCCGATCGTCTGCTTGTCGCTCTCGGAAACGAGAAGATCTACAAGTCCTC 42549 Query 61854 AAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAA 61913 ||||| ||||| || ||||| | ||||| |||| |||||||| || || |||||||| Sbjct 42548 CAACCCCTTTGACTTTATGGAGAACATTTCTCTGGGCGGCAAGACCAACTTCTTCGAGAA 42489 Query 61914 ACGTGTAGGCGACTATCA 61931 ||||| ||||| || || Sbjct 42488 GCGTGTCGGCGAGTACCA 42471 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397561027526960