Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20atroviride_20[genbank_20GCA_5F000963795.1_202015-03-
26] 131 sequences; 36,403,196 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq99 717 0.0
seq120 107 8e-21
>seq99
Length=2041487
Score = 717 bits (794), Expect = 0.0
Identities = 565/665 (85%), Gaps = 15/665 (2%)
Strand=Plus/Minus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||| |||||||||||||||||||||| |||||||||||| |||| |||||||||||| ||
Sbjct 1314642 TGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCAAAATGGGAGGTATAT 1314583
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1314582 GTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 1314523
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
|||||||||| ||| |||||| |||||| || ||||||||||||||||||||||||||||
Sbjct 1314522 TGAAAAGCACCTTGAAAAGAGGGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTT 1314463
Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACC-GGCCCCTCGGCCGGTGCACTCTTCTGCGG 261
| |||||||||| ||| | | ||| || || ||| |||||||||| | | |
Sbjct 1314462 GTGACCAGACTTGGGCGCGGCGGATCATCCGGGGTTCTC-CCCGGTGCACTTCGCCGTGT 1314404
Query 262 TCAGGCCAGCATCAGCTCGG-GCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGG 320
||||||||||||||| |||| |||| ||| |||||| |||||| ||||| || || |
Sbjct 1314403 TCAGGCCAGCATCAGTTCGGCGCGG-GGGAAAAAGGCTTCGGGAACGTGGCTCC--TCCG 1314347
Query 321 GGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGC-CTGGACTGAGGTCCGCGCTCCGGCT 379
|| ||||||||||||| | ||| | || || ||||||||||| |||||| | ||
Sbjct 1314346 GGAGTGTTATAGCCCGTTGCATAATAC--CCTGCGCTGGACTGAGGACCGCGCATCTGCA 1314289
Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439
||||||||||||||||||| |||| ||||||||| |||||||||||||||||| |
Sbjct 1314288 AGGATGCTGGCGTAATGGTCACCAGCGACCCGTCTTGAAACACGGACCAAGGAGTC-GTC 1314230
Query 440 ATC-TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498
|| |||||||||||| ||||||||||||| | ||||||||||||||||||| ||||| |
Sbjct 1314229 TTCGTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGCAGGTGAG 1314170
Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558
| | || ||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1314169 A----GCTTCGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTTGAGTAAGAGC 1314114
Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618
||| | |||||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct 1314113 ATACGGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTATAGGGTGAAGCCAGAGGAAA 1314054
Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678
||||||||||||||||||||||||||| ||||||||||||||||||||| |||| || ||
Sbjct 1314053 CTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGGGCATGGG 1313994
Query 679 GGCGA 683
|||||
Sbjct 1313993 GGCGA 1313989
>seq120
Length=597
Score = 107 bits (118), Expect = 8e-21
Identities = 81/94 (86%), Gaps = 1/94 (1%)
Strand=Plus/Plus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||||||||||| |||||||||||||| |||||||||||| ||||| || |||||||| |
Sbjct 505 TGTGAAGCTCCCTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCT-AAGGGGAGGTATAC 563
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGAT 116
| |||| || |||||||| ||| ||||||||||
Sbjct 564 TCCTTCCAAGGCTAAATACCGGCTAGAGACCGAT 597
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079997190050
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |