Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20atroviride_20[genbank_20GCA_5F000963795.1_202015-03- 26] 131 sequences; 36,403,196 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq47 86.0 1e-14 >seq47 Length=31479 Score = 86.0 bits (94), Expect = 1e-14 Identities = 112/154 (73%), Gaps = 1/154 (1%) Strand=Plus/Minus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68 |||| ||| | ||| ||||||||| ||||| || | ||||||| |||||||| Sbjct 18273 ATCTGCACAGCTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGTATCGTTAC 18214 Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128 || ||| ||| | | | | ||| | | ||||| ||||||||||||||||||| | | Sbjct 18213 ACCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGACCCTCA-C 18155 Query 129 GTTACGGCCGCCGTTTACTGGGGCTTAAGTTCAC 162 |||| ||||||| || || |||| || || ||| Sbjct 18154 GTTAAGGCCGCCTTTAACCGGGGTTTCCGTCCAC 18121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062398608256