Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20atroviride_20[genbank_20GCA_5F000963795.1_202015-03-
26] 131 sequences; 36,403,196 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq99 235 9e-60
seq1 93.3 7e-17
>seq99
Length=2041487
Score = 235 bits (260), Expect = 9e-60
Identities = 225/279 (81%), Gaps = 8/279 (3%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| ||||||||||||||||||||| |||| ||||||
Sbjct 1311906 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 1311849
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1311848 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 1311789
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||| ||||| | | || |||| | ||| |||| | |||||||||||||| |
Sbjct 1311788 GAACGCGGTGA-TAGCACCCGCACGT-ATAGACGGACAAGAATAGGCTTCGGCTTAGTGT 1311731
Query 181 CTTAGCAGGC-CGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239
|| ||||||| | | | |||| |||||| | ||| | | | ||| ||||
Sbjct 1311730 CTCAGCAGGCGATTCCTCCGTGGTCC--TCGAAGCGGGCCGCGGT-ATTTCGCGTATTGT 1311674
Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||||| || | || ||| |||||||||||||||||||
Sbjct 1311673 AATTTCAACACGAGCGGGGTTAAATCCTTTGCAGACGAC 1311635
>seq1
Length=3480556
Score = 93.3 bits (102), Expect = 7e-17
Identities = 59/63 (94%), Gaps = 1/63 (2%)
Strand=Plus/Minus
Query 62 CCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAG 121
||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||| |
Sbjct 281167 CCGCGAAGC-ACCATCTGCTGGATAATGGCTGAACGCCTCCAAGTCAGAATCCATGCCGG 281109
Query 122 AAC 124
|||
Sbjct 281108 AAC 281106
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819198960384
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |