Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20atroviride_20[genbank_20GCA_5F000963795.1_202015-03-
26] 131 sequences; 36,403,196 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq66 304 1e-77
seq35 262 3e-65
>seq66
Length=2244893
Score = 304 bits (336), Expect = 1e-77
Identities = 1142/1761 (65%), Gaps = 54/1761 (3%)
Strand=Plus/Plus
Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136
||| || ||||||||||| | ||| || |||| ||| | || ||||||||||| ||
Sbjct 1019828 ATCAACTGTGAACTGGATAGGTGCAGCCGCAGCCTGGGTACGCAGGTAGTACATGCCAGT 1019887
Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCT 65195
|||||| ||| ||| || ||| ||||| | || |||| |||| | | | || |
Sbjct 1019888 CTTGAGACCAAGCTTCCAGCCAGTGAAGTGCAT-GCTGGTAATCTTGCCCATTGTGGGAT 1019946
Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255
| || || || ||||| ||||| |||||| ||| || |||||| || || | ||
Sbjct 1019947 CCTTCATGTGGATGTTCAAGGACTGGGACTGATCAATGAAAGCACCACGGTCGGCTGACA 1020006
Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCA 65314
| | | ||| | || || |||||||| || |||||||||||| | | | | ||
Sbjct 1020007 TCTGGACGATGTGGCGCTGAGAGATCTCCCAAACAGTCTTGTACAGG-GCCTTGATGTCG 1020065
Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATC 65374
||||| | ||||| ||||| ||||| ||||| ||||| || |||
Sbjct 1020066 GCGGGAATGTTGGGAATGTTCTGGATAGAACCGTTCTCAGCAATGATGCGGTTCTTCATA 1020125
Query 65375 GACTCTGACCACAAACCCAAATCGATAAGATG-TTGAACCAAGTGACGA-TTGATGACTT 65432
| || ||||| | || ||||| ||||| |||| ||| | | |||| || |
Sbjct 1020126 GCATCGGACCAGAGGCCAGTATCGACAAGATCCTTGAG--AAGCCAGGGGTTGACAACCT 1020183
Query 65433 GGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATT 65492
|||||||||| | || ||||| || ||||||||||| ||| ||| || ||| |||
Sbjct 1020184 GGAACTCGCCAGCAAGGACACGTCGCTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCATT 1020243
Query 65493 CAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGT 65552
|| ||||||| || || |||| ||| ||||| |||||||| ||||| | ||| ||
Sbjct 1020244 CATTGTTGCCCAGGATCTGGGAAGTGCTGGCAGTGGGCATGGGGGCGACGAGCAAACTGT 1020303
Query 65553 TTCGCAATCCGTTCATTTCAATGTTGT----GACGCAATTCGTCCCAGTTCCACATCGGT 65608
| || | |||| | | ||| | | || || | |||||| | ||||| |||
Sbjct 1020304 TGCGAATACCGTGCTCCTTAATCTGCTCCTTGA-GCGA---GTCCCACTCCCACA--GGT 1020357
Query 65609 TTATCGTC--GACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTG 65666
| | | ||||||| |||| || || || | || | ||| ||||
Sbjct 1020358 CAGTGGGCTTGACATCC------CACAAGTCAAACTGGAGAATGCCTTCAGAGGCGGGTG 1020411
Query 65667 AACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTG-ACAGCTGGTCTCGAGT 65725
| || ||| || || ||||| |||||||| | | || || ||||||
Sbjct 1020412 ATCCCTTGAATGACTCATAAGGACCCTCGATCTTGGCAATCTCCATAGATGC-CTCGAGG 1020470
Query 65726 GCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCG 65785
|| || || |||||||| || || | || | || || || || |||
Sbjct 1020471 GCAGCGTGGTAGATGGTCTCAAAGATTTGCTTGTTCAACTCGCGAGCTTCGGGTGATTCG 1020530
Query 65786 TACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGA 65845
| || | || || || |||| ||| || ||||| ||||| |||| ||| |||||
Sbjct 1020531 AAAGGAAGACGCAGAGCGAGGAAAGCGTCAGCAAGACCCTGAACACCAACACCAATGGGT 1020590
Query 65846 CGATGACGCAAATTGGAACGTCTCG--CCTCAGGTACAGGGTAGTAATTGATATCGATAA 65903
|| || || || | || || |||| | || |||||||| || | |||||| |
Sbjct 1020591 CGGTGGCGGCTGTT--ACTGTTGCGAGCCTCCTGAACGGGGTAGTAGTTCACATCGATGA 1020648
Query 65904 TGCGATTCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAATCAAAAT 65963
|||| || | || || ||||| | | || ||| | ||| | ||| |
Sbjct 1020649 TGCGGTTGAGGTTACGGACAACCACCTTG--GTAACATCGTGAAGCTTC----TTAAAGT 1020702
Query 65964 GTTTAGGA-CGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGG 66022
| || | | ||| | | || ||||| || || || | ||| || | |
Sbjct 1020703 CAT-AGCAGCCTTCGTTATAGTCG------ACAAAGGCAGGGAGAGCCAAAGAGGCCAAG 1020755
Query 66023 TTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTG 66082
||||||||||| | ||||||||| || | ||||| || || || ||||| || || |
Sbjct 1020756 TTGCAGACAGCGACCTCGTCAGGGGCAGAGTACTCAACGATCTCAGTGCAGAGGTTGGAG 1020815
Query 66083 CAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATC 66142
| || ||||| |||| |||| || || |||||||| ||||| ||||||||||| | |
Sbjct 1020816 CTTCGGATGGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAAAGC 1020875
Query 66143 ATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCC 66202
|| | || | || |||||| |||| ||| | ||||| || ||| || | ||
Sbjct 1020876 ATAAAGGGGTTACCAGTCTCAGTCTGGGCCTCTAGGATGGAGTACCACAGCTTCTGAGCT 1020935
Query 66203 TTCACCGTACGTACCGCCCTACCTTTGCGT-TCGTAATGTTCGTAGAGGTGTTCGAAGGA 66261
| || | | | |||| | | | | ||||| | || || || |||||
Sbjct 1020936 CGGATAGT-CTTGCGACCCTTGCCCTCCTTCTCGTACTTCTCATACAGAGCCTCGAATTC 1020994
Query 66262 TTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACC 66321
||| || | || | || | || || | || || ||||||| | ||| ||
Sbjct 1020995 TTCGCCATAGCAGTCAGCAAGGCCAGGGCATTCGTTGGGGCACATCAAAGTCCAGTCCAA 1021054
Query 66322 ATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCG 66381
| || || ||||| ||| || |||||||| |||||||| ||| ||| || || ||
Sbjct 1021055 GTTCTTCTCAACACGCTTCATGAACAGATCAGGGATCCAGAGAGCGAGGAACAGGTCACG 1021114
Query 66382 TGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGC 66441
|| || ||| || ||||||| || ||||| | ||| ||||||||||||| |||||
Sbjct 1021115 GGCACGGACCTCTTCCTTGCCGTGGTTCTTGCGGAGGTCAAGGAACTCAAAGACATCGGC 1021174
Query 66442 ATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGAC 66501
||||| || || ||||||||||| || | || || ||| |||||| ||||||||
Sbjct 1021175 GTGCCAAGGCTCGAGGTAGATGGCAAAGGCACCAGGGCGCTTGTTGCCACCCTGGTCGAC 1021234
Query 66502 GTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATT 66561
||| | || ||||||||||| || | ||| || | || ||||| || | || ||
Sbjct 1021235 GTATCTGGCAGTGTTGTTGAAGACTCGAAGCATGGGGATGATACCGTTGGAGGTACCGTT 1021294
Query 66562 GGTGCCGTCGATGGGGGATCCTCGT-GCCCGTATATCGTGAACATTCAGACCAATACCAC 66620
||||||| | ||| || || ||| || || ||| ||| || ||||| || |||||||
Sbjct 1021295 GGTGCCGGCAATGTAAGAGCC-CGTAGCACGGATACGGTGGACGTTCAGGCCGATACCAC 1021353
Query 66621 CGGCCGTCTTCGAGATGGCAGCACA-ATC-GGCCACTGTCCGGAATATGCCGTCAATGGA 66678
| ||| |||| || || ||||| || | |||| | | || || ||||||
Sbjct 1021354 CAGCCATCTTGGAAATCATGGCACATGTCTTTAGAGTGTC--GTAGATACCCTCAATGCT 1021411
Query 66679 GTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGA 66738
||| |||| ||| || ||| ||||||| || || | || || || | ||
Sbjct 1021412 GTCGTCCTTCATGTCCACCAGGAAGCATGAGGACAGCTGAGCTTGTGGGGTACCAGCGTT 1021471
Query 66739 GAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGAT 66798
|||||||||||| | || || |||||| | | || |||||| | ||| ||||| |
Sbjct 1021472 GAAGAGGGTGGGAGAGGCATGGGTAAAGAATTTGCTGGACATGAGGTGGTATGTCTCAAG 1021531
Query 66799 GACAGCATCAATGTTTTCGCC 66819
|||| |||||||| || ||
Sbjct 1021532 GACACGCTCAATGTTGTCTCC 1021552
>seq35
Length=1329723
Score = 262 bits (290), Expect = 3e-65
Identities = 584/860 (68%), Gaps = 30/860 (3%)
Strand=Plus/Minus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||||||||| || |||||||||||||| | || ||| | ||| ||
Sbjct 994923 ATCTGGCAAATGTACAAAAAGGCCGAGGCTTCCTTCTGGACCGCCGAAGAGATTGATCTG 994864
Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTT-ATCGA-GCGGTGAACAACATTTCATTA 61201
||||| || || | |||||| | || | | ||| | | ||| || |||||
Sbjct 994863 TCCAAGGATCTGCACGACTGGAACAACCGCCTGAACGATGACGAGAAGTAC--TTCATCT 994806
Query 61202 AACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAAC 61261
|| | |||| |||||||| || || ||||| || ||||| ||||| | | || |
Sbjct 994805 CTCACATCCTGGCCTTCTTTGCTGCCTCCGACGGCATTGTCAACGAGAACCTGGTCGAGC 994746
Query 61262 GTTTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCC 61320
||||| || | ||||| || | | ||||| || || |||||||| ||||||||
Sbjct 994745 GTTTCA-GCGGCGAGGTTCAGATCCCCGAGGCTCGATGCTTCTACGGTTTCCAGATCATG 994687
Query 61321 ATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGG 61380
|||||||| ||||||| |||| ||| | |||||||| || ||| ||| |||||
Sbjct 994686 ATGGAGAACATCCACTCCGAGACCTACTCCCTGCTCATCGACACCTACGTCAAGGAGCAC 994627
Query 61381 GCGGAACGTGAACGAT-TGTTCAATGCCATCGAGACGATACCGG----CGGTGAAGCGGA 61435
| || ||| | | ||||| ||||| ||||| || || | || | ||
Sbjct 994626 AGCCAGCGC-AACTACCTCTTCAACGCCATTGAGACCATTCCTTGCATCCGTAA----GA 994572
Query 61436 AAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTA--CATTTGGTGAACGATT 61493
| || || |||||| |||| |||||| ||| |||| | || | |||| | | || |
Sbjct 994571 AGGCTGACTGGGCCATCAAGTGGATC--CAGGACAAGGACTCTTCCTTTGCTCAGCGCCT 994514
Query 61494 GCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTG 61553
| || ||||| | ||||||||| | || ||||| ||| | |||||| | ||||| ||
Sbjct 994513 TGTTGCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGCGGAGCCTTTGCCTCCATCTTCTG 994454
Query 61554 GTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGA 61613
| | ||||| | || || ||||| || ||||||||| ||| ||| | || || || ||
Sbjct 994453 GCTCAAGAAGAGAGGTCTCATGCCTGGCCTGACCTTCTCCAACGAGCTCATCTCTCGTGA 994394
Query 61614 CGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCC 61673
||||||| |||| || |||||| |||| || | | | ||| ||| || |
Sbjct 994393 CGAGGGCCTGCACACCGACTTTGCTTGCCTGCTC--CACTCTC-ACCTGAAGAACCG--C 994339
Query 61674 GTCGG--AGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTT 61731
| | | ||||| | | |||| || | ||| || || | ||||| || || ||
Sbjct 994338 GCCAGCAAGGAGATTATCCGTGAAATCATCACTGATGCCGTCAGAATCGAGCAAGAGTTC 994279
Query 61732 CTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTAT 61791
|||| || ||| | ||| | || | |||||||| || ||| ||||||
Sbjct 994278 TTGACCGAGGCTCTCCCCTGTGCTCTGCTGGGCATGAACGCCACCCTGATGAAGCAGTAC 994219
Query 61792 ATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACG 61851
||||| ||||||||||| |||||| | |||| | | || | || ||| || || |
Sbjct 994218 ATTGAGTTTGTTGCCGATCGTCTGCTCGTCGCTCTTGGCAACGAGAAGATTTACAAGTCC 994159
Query 61852 AAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAG 61911
||||| ||||| |||||||| | || || |||| |||||||| || || ||||||
Sbjct 994158 TCCAACCCCTTTGACTTCATGGAGAACATCTCCCTGGGCGGCAAGACCAACTTCTTCGAG 994099
Query 61912 AAACGTGTAGGCGACTATCA 61931
|| ||||| ||||| || ||
Sbjct 994098 AAGCGTGTCGGCGAGTACCA 994079
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567365257840
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