Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20atroviride_20[genbank_20GCA_5F001599035.1_202016-03- 01] 23 sequences; 37,316,984 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq1 93.3 6e-17 >seq1 Length=7294945 Score = 93.3 bits (102), Expect = 6e-17 Identities = 108/143 (76%), Gaps = 12/143 (8%) Strand=Plus/Minus Query 70 GACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTACCCGGACCT 129 || || ||||||||| | |||||||||| ||||||| | ||| |||||||||| | ||| Sbjct 6404611 GAGCAGCAATTGCAACGCTCTATCCCCAGCACGATGGAGTTT--AAGATTACCCAGGCCT 6404554 Query 130 GTCGGCCAAGGTGATAGA---CTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGA 186 | |||| || ||| ||| || | | ||||||||||||| | | ||||||| Sbjct 6404553 GGTGGCC-----GAAAGAGTGCTCACTGTCTCCGTCAGTGTAGCGCGAG--CTGCCCAGA 6404501 Query 187 ACATCTAAGGGCATCACAGACCT 209 ||||||| ||||||| |||||| Sbjct 6404500 ACATCTAGCGGCATCATAGACCT 6404478 Score = 82.4 bits (90), Expect = 1e-13 Identities = 104/140 (74%), Gaps = 6/140 (4%) Strand=Plus/Minus Query 70 GACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTACCCGGACCT 129 || ||| |||||||||| | |||||||| ||| | | | ||| |||||| ||| | ||| Sbjct 6404939 GAGCAATAATTGCAATGCTTTATCCCCAGCACAACGGAGTTTAGAAGATTGCCCAGCCCT 6404880 Query 130 GTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACA 189 || ||| | || | |||| | | ||||||| | ||| |||||||||||||| Sbjct 6404879 TCTGGTCAAAG-GAGTG-CTCGCTC----CGTCAGTGTGACTCGCATGCGGCCCAGAACA 6404826 Query 190 TCTAAGGGCATCACAGACCT 209 || | ||||||||||||||| Sbjct 6404825 TCGAGGGGCATCACAGACCT 6404806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751999832445