Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20atroviride_20[genbank_20GCA_5F001599035.1_202016-03- 01] 23 sequences; 37,316,984 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq7 221 2e-55 seq1 73.4 6e-11 >seq7 Length=2824016 Score = 221 bits (244), Expect = 2e-55 Identities = 192/233 (82%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 31 TGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATT----GCCTCAAACTTCCATT 86 ||| ||||||||||||| || |||||||||||||||||| ||||||||||||||| Sbjct 22874 TGCAGCCCAGAACATCTCAGAACATCACAGACCTGTTATTTATTGCCTCAAACTTCCATC 22815 Query 87 GGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCGATG-GGGCTAT 145 |||| || ||| |||||||||||||||||||||| | || || | || ||||| | Sbjct 22814 GGCTTGA-GCCGATAGTCCCTCTAAGAAGCCAGCGTACTGCCGAAG-CAATACGGGCTCT 22757 Query 146 TTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTA 205 |||| |||| ||||||| ||| ||||||| || || |||||||||||||||||| ||| Sbjct 22756 TTAGTAGGTCAAGGTCTAGTTTGTTATCGCCATAAAATAGACAAATCACTCCACCA-CTA 22698 Query 206 AGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||| |||||| |||| ||||||||| |||| | |||||||| Sbjct 22697 AGAACGGCCATGCATCACCACTCATAACATCAAGAAAAAGCTCTTAATCTGTC 22645 >seq1 Length=7294945 Score = 73.4 bits (80), Expect = 6e-11 Identities = 49/55 (89%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 10 GCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCT 64 ||||||||||||| | ||| |||||||||||||||| | ||||||||||||||| Sbjct 6404860 GCTCCGTCAGTGTGACTCGCATGCGGCCCAGAACATCGAGGGGCATCACAGACCT 6404806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796799822463