Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20atroviride_20[genbank_20GCA_5F001599035.1_202016-03-
01] 23 sequences; 37,316,984 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq7 221 2e-55
seq1 73.4 6e-11
>seq7
Length=2824016
Score = 221 bits (244), Expect = 2e-55
Identities = 192/233 (82%), Gaps = 8/233 (3%)
Strand=Plus/Minus
Query 31 TGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATT----GCCTCAAACTTCCATT 86
||| ||||||||||||| || |||||||||||||||||| |||||||||||||||
Sbjct 22874 TGCAGCCCAGAACATCTCAGAACATCACAGACCTGTTATTTATTGCCTCAAACTTCCATC 22815
Query 87 GGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCGATG-GGGCTAT 145
|||| || ||| |||||||||||||||||||||| | || || | || ||||| |
Sbjct 22814 GGCTTGA-GCCGATAGTCCCTCTAAGAAGCCAGCGTACTGCCGAAG-CAATACGGGCTCT 22757
Query 146 TTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTA 205
|||| |||| ||||||| ||| ||||||| || || |||||||||||||||||| |||
Sbjct 22756 TTAGTAGGTCAAGGTCTAGTTTGTTATCGCCATAAAATAGACAAATCACTCCACCA-CTA 22698
Query 206 AGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
|||||||||||||| |||||| |||| ||||||||| |||| | ||||||||
Sbjct 22697 AGAACGGCCATGCATCACCACTCATAACATCAAGAAAAAGCTCTTAATCTGTC 22645
>seq1
Length=7294945
Score = 73.4 bits (80), Expect = 6e-11
Identities = 49/55 (89%), Gaps = 0/55 (0%)
Strand=Plus/Minus
Query 10 GCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCT 64
||||||||||||| | ||| |||||||||||||||| | |||||||||||||||
Sbjct 6404860 GCTCCGTCAGTGTGACTCGCATGCGGCCCAGAACATCGAGGGGCATCACAGACCT 6404806
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796799822463
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |