Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20atroviride_20[genbank_20GCA_5F001599035.1_202016-03- 01] 23 sequences; 37,316,984 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq7 149 1e-33 seq1 131 3e-28 >seq7 Length=2824016 Score = 149 bits (164), Expect = 1e-33 Identities = 114/135 (84%), Gaps = 4/135 (3%) Strand=Plus/Plus Query 25 AGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGA 84 ||||||| |||| ||||| |||| | |||| ||| | ||| ||||||||||||||| Sbjct 22740 AGACCTTGACCTACTAAAGAGCCCGTATTGCTTCGGCAGTACGCTGGCTTCTTAGAGGGA 22799 Query 85 CTATCGGCTCAAGCCGATGGAAGTTTGAGGC----AATAACAGGTCTGTGATGCCCTTAG 140 ||||||||||||||||||||||||||||||| |||||||||||||||||| || || Sbjct 22800 CTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAAATAACAGGTCTGTGATGTTCTGAG 22859 Query 141 ATGTTCTGGGCCGCA 155 ||||||||||| ||| Sbjct 22860 ATGTTCTGGGCTGCA 22874 >seq1 Length=7294945 Score = 131 bits (144), Expect = 3e-28 Identities = 115/141 (82%), Gaps = 7/141 (5%) Strand=Plus/Plus Query 122 AGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACG 181 ||||||||||||||| | |||||||||||||||| ||| | |||||||| ||| || Sbjct 6404806 AGGTCTGTGATGCCCCTCGATGTTCTGGGCCGCATGCGAGTCACACTGACGGAG----CG 6404861 Query 182 AGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGAT 241 || || | ||| || ||||| ||||| |||||| ||||||| || ||||||||||| Sbjct 6404862 AG--CACTCCTTTGACCAGAAGGGCTGGGCAATCTT-CTAAACTCCGTTGTGCTGGGGAT 6404918 Query 242 AGAGCATTGCAATTATTGCTC 262 | ||||||||||||||||||| Sbjct 6404919 AAAGCATTGCAATTATTGCTC 6404939 Score = 114 bits (126), Expect = 2e-23 Identities = 83/96 (86%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 |||| || |||||||||||||||||||| | |||||||| | |||||||||||||| Sbjct 6405686 GAGCTAGCCCTTAACCTGCTAAATAGCCCGTATTGCTTTGGCAGTACGCCGGCTTCTTAG 6405745 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGC 115 ||||||||||||| ||||| |||| ||||||||||| Sbjct 6405746 AGGGACTATCGGCCCAAGCTGATGAAAGTTTGAGGC 6405781 Score = 111 bits (122), Expect = 3e-22 Identities = 113/142 (80%), Gaps = 9/142 (6%) Strand=Plus/Plus Query 122 AGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACG 181 |||||| ||||||| |||||||||||||| || ||||| ||||||||| ||| || | Sbjct 6404478 AGGTCTATGATGCCGCTAGATGTTCTGGGCAGCTCGCGC--TACACTGACGGAGACAGTG 6404535 Query 182 AGTTCATCACCTT-GGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGA 240 || || | | || |||| ||| |||||||||||| |||||| |||||||||||| Sbjct 6404536 AG--CA-CTCTTTCGGCCACCAGGCCTGGGTAATCTT---AAACTCCATCGTGCTGGGGA 6404589 Query 241 TAGAGCATTGCAATTATTGCTC 262 |||||| |||||||| ||||| Sbjct 6404590 TAGAGCGTTGCAATTGCTGCTC 6404611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947199782144