Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20atroviride_20[genbank_20GCA_5F001599035.1_202016-03- 01] 23 sequences; 37,316,984 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq7 82.4 2e-13 >seq7 Length=2824016 Score = 82.4 bits (90), Expect = 2e-13 Identities = 137/197 (70%), Gaps = 21/197 (11%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGA-GTCAAGCTCA 295 || |||| |||||||||| || | | |||||| | || | | || | |||||||| Sbjct 255060 CTTCCACCTATTCTACACTTCCAATACCTTTTCACTCA-TC--ATTTGAAGCCAAGCTCA 255116 Query 296 ACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTA 355 | || ||| ||||||||| |||||| |||||| | |||||| Sbjct 255117 AGAGAAGCTTGTTTCCCCGCCAATTCCGTAAAGCCCATG---------------TCGCTA 255161 Query 356 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 415 |||||| |||| ||| | || |||| || |||| ||||| |||||| |||||||||| Sbjct 255162 GATAGTGAATAGAGACGGAGG--ATCTGATTGATCCCTTCATACGCGTCGCTAATTAGAT 255219 Query 416 GACGAGGCATTTGGCTA 432 |||||||||||| || Sbjct 255220 AGCGAGGCATTTGGATA 255236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635199623904