Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20atroviride_20[genbank_20GCA_5F001599035.1_202016-03-
01] 23 sequences; 37,316,984 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq7 82.4 2e-13
>seq7
Length=2824016
Score = 82.4 bits (90), Expect = 2e-13
Identities = 137/197 (70%), Gaps = 21/197 (11%)
Strand=Plus/Plus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGA-GTCAAGCTCA 295
|| |||| |||||||||| || | | |||||| | || | | || | ||||||||
Sbjct 255060 CTTCCACCTATTCTACACTTCCAATACCTTTTCACTCA-TC--ATTTGAAGCCAAGCTCA 255116
Query 296 ACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTA 355
| || ||| ||||||||| |||||| |||||| | ||||||
Sbjct 255117 AGAGAAGCTTGTTTCCCCGCCAATTCCGTAAAGCCCATG---------------TCGCTA 255161
Query 356 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 415
|||||| |||| ||| | || |||| || |||| ||||| |||||| ||||||||||
Sbjct 255162 GATAGTGAATAGAGACGGAGG--ATCTGATTGATCCCTTCATACGCGTCGCTAATTAGAT 255219
Query 416 GACGAGGCATTTGGCTA 432
|||||||||||| ||
Sbjct 255220 AGCGAGGCATTTGGATA 255236
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635199623904
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |