Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20atroviride_20[genbank_20GCA_5F001599035.1_202016-03- 01] 23 sequences; 37,316,984 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1 304 1e-77 seq7 268 7e-67 >seq1 Length=7294945 Score = 304 bits (336), Expect = 1e-77 Identities = 1142/1761 (65%), Gaps = 54/1761 (3%) Strand=Plus/Minus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 ||| || ||||||||||| | ||| || |||| ||| | || ||||||||||| || Sbjct 1234435 ATCAACTGTGAACTGGATAGGTGCAGCCGCAGCCTGGGTACGCAGGTAGTACATGCCAGT 1234376 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCT 65195 |||||| ||| ||| || ||| ||||| | || |||| |||| | | | || | Sbjct 1234375 CTTGAGACCAAGCTTCCAGCCAGTGAAGTGCAT-GCTGGTAATCTTGCCCATTGTGGGAT 1234317 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255 | || || || ||||| ||||| |||||| ||| || |||||| || || | || Sbjct 1234316 CCTTCATGTGGATGTTCAAGGACTGGGACTGATCAATGAAAGCACCACGGTCGGCTGACA 1234257 Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCA 65314 | | | ||| | || || |||||||| || |||||||||||| | | | | || Sbjct 1234256 TCTGGACGATGTGGCGCTGAGAGATCTCCCAAACAGTCTTGTACAGG-GCCTTGATGTCG 1234198 Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATC 65374 ||||| | ||||| ||||| ||||| ||||| ||||| || ||| Sbjct 1234197 GCGGGAATGTTGGGAATGTTCTGGATAGAACCGTTCTCAGCAATGATGCGGTTCTTCATA 1234138 Query 65375 GACTCTGACCACAAACCCAAATCGATAAGATG-TTGAACCAAGTGACGA-TTGATGACTT 65432 | || ||||| | || ||||| ||||| |||| ||| | | |||| || | Sbjct 1234137 GCATCGGACCAGAGGCCAGTATCGACAAGATCCTTGAG--AAGCCAGGGGTTGACAACCT 1234080 Query 65433 GGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATT 65492 |||||||||| | || ||||| || ||||||||||| ||| ||| || ||| ||| Sbjct 1234079 GGAACTCGCCAGCAAGGACACGTCGCTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCATT 1234020 Query 65493 CAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGT 65552 || ||||||| || || |||| ||| ||||| |||||||| ||||| | ||| || Sbjct 1234019 CATTGTTGCCCAGGATCTGGGAAGTGCTGGCAGTGGGCATGGGGGCGACGAGCAAACTGT 1233960 Query 65553 TTCGCAATCCGTTCATTTCAATGTTGT----GACGCAATTCGTCCCAGTTCCACATCGGT 65608 | || | |||| | | ||| | | || || | |||||| | ||||| ||| Sbjct 1233959 TGCGAATACCGTGCTCCTTAATCTGCTCCTTGA-GCGA---GTCCCACTCCCACA--GGT 1233906 Query 65609 TTATCGTC--GACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTG 65666 | | | ||||||| |||| || || || | || | ||| |||| Sbjct 1233905 CAGTGGGCTTGACATCC------CACAAGTCAAACTGGAGAATGCCTTCAGAGGCGGGTG 1233852 Query 65667 AACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTG-ACAGCTGGTCTCGAGT 65725 | || ||| || || ||||| |||||||| | | || || |||||| Sbjct 1233851 ATCCCTTGAATGACTCATAAGGACCCTCGATCTTGGCAATCTCCATAGATGC-CTCGAGG 1233793 Query 65726 GCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCG 65785 || || || |||||||| || || | || | || || || || ||| Sbjct 1233792 GCAGCGTGGTAGATGGTCTCAAAGATTTGCTTGTTCAACTCGCGAGCTTCGGGTGATTCG 1233733 Query 65786 TACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGA 65845 | || | || || || |||| ||| || ||||| ||||| |||| ||| ||||| Sbjct 1233732 AAAGGAAGACGCAGAGCGAGGAAAGCGTCAGCAAGACCCTGAACACCAACACCAATGGGT 1233673 Query 65846 CGATGACGCAAATTGGAACGTCTCG--CCTCAGGTACAGGGTAGTAATTGATATCGATAA 65903 || || || || | || || |||| | || |||||||| || | |||||| | Sbjct 1233672 CGGTGGCGGCTGTT--ACTGTTGCGAGCCTCCTGAACGGGGTAGTAGTTCACATCGATGA 1233615 Query 65904 TGCGATTCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAATCAAAAT 65963 |||| || | || || ||||| | | || ||| | ||| | ||| | Sbjct 1233614 TGCGGTTGAGGTTACGGACAACCACCTTG--GTAACATCGTGAAGCTTC----TTAAAGT 1233561 Query 65964 GTTTAGGA-CGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGG 66022 | || | | ||| | | || ||||| || || || | ||| || | | Sbjct 1233560 CAT-AGCAGCCTTCGTTATAGTCG------ACAAAGGCAGGGAGAGCCAAAGAGGCCAAG 1233508 Query 66023 TTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTG 66082 ||||||||||| | ||||||||| || | ||||| || || || ||||| || || | Sbjct 1233507 TTGCAGACAGCGACCTCGTCAGGGGCAGAGTACTCAACGATCTCAGTGCAGAGGTTGGAG 1233448 Query 66083 CAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATC 66142 | || ||||| |||| |||| || || |||||||| ||||| ||||||||||| | | Sbjct 1233447 CTTCGGATGGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAAAGC 1233388 Query 66143 ATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCC 66202 || | || | || |||||| |||| ||| | ||||| || ||| || | || Sbjct 1233387 ATAAAGGGGTTACCAGTCTCAGTCTGGGCCTCTAGGATGGAGTACCACAGCTTCTGAGCT 1233328 Query 66203 TTCACCGTACGTACCGCCCTACCTTTGCGT-TCGTAATGTTCGTAGAGGTGTTCGAAGGA 66261 | || | | | |||| | | | | ||||| | || || || ||||| Sbjct 1233327 CGGATAGT-CTTGCGACCCTTGCCCTCCTTCTCGTACTTCTCATACAGAGCCTCGAATTC 1233269 Query 66262 TTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACC 66321 ||| || | || | || | || || | || || ||||||| | ||| || Sbjct 1233268 TTCGCCATAGCAGTCAGCAAGGCCAGGGCATTCGTTGGGGCACATCAAAGTCCAGTCCAA 1233209 Query 66322 ATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCG 66381 | || || ||||| ||| || |||||||| |||||||| ||| ||| || || || Sbjct 1233208 GTTCTTCTCAACACGCTTCATGAACAGATCAGGGATCCAGAGAGCGAGGAACAGGTCACG 1233149 Query 66382 TGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGC 66441 || || ||| || ||||||| || ||||| | ||| ||||||||||||| ||||| Sbjct 1233148 GGCACGGACCTCTTCCTTGCCGTGGTTCTTGCGGAGGTCAAGGAACTCAAAGACATCGGC 1233089 Query 66442 ATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGAC 66501 ||||| || || ||||||||||| || | || || ||| |||||| |||||||| Sbjct 1233088 GTGCCAAGGCTCGAGGTAGATGGCAAAGGCACCAGGGCGCTTGTTGCCACCCTGGTCGAC 1233029 Query 66502 GTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATT 66561 ||| | || ||||||||||| || | ||| || | || ||||| || | || || Sbjct 1233028 GTATCTGGCAGTGTTGTTGAAGACTCGAAGCATGGGGATGATACCGTTGGAGGTACCGTT 1232969 Query 66562 GGTGCCGTCGATGGGGGATCCTCGT-GCCCGTATATCGTGAACATTCAGACCAATACCAC 66620 ||||||| | ||| || || ||| || || ||| ||| || ||||| || ||||||| Sbjct 1232968 GGTGCCGGCAATGTAAGAGCC-CGTAGCACGGATACGGTGGACGTTCAGGCCGATACCAC 1232910 Query 66621 CGGCCGTCTTCGAGATGGCAGCACA-ATC-GGCCACTGTCCGGAATATGCCGTCAATGGA 66678 | ||| |||| || || ||||| || | |||| | | || || |||||| Sbjct 1232909 CAGCCATCTTGGAAATCATGGCACATGTCTTTAGAGTGTC--GTAGATACCCTCAATGCT 1232852 Query 66679 GTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGA 66738 ||| |||| ||| || ||| ||||||| || || | || || || | || Sbjct 1232851 GTCGTCCTTCATGTCCACCAGGAAGCATGAGGACAGCTGAGCTTGTGGGGTACCAGCGTT 1232792 Query 66739 GAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGAT 66798 |||||||||||| | || || |||||| | | || |||||| | ||| ||||| | Sbjct 1232791 GAAGAGGGTGGGAGAGGCATGGGTAAAGAATTTGCTGGACATGAGGTGGTATGTCTCAAG 1232732 Query 66799 GACAGCATCAATGTTTTCGCC 66819 |||| |||||||| || || Sbjct 1232731 GACACGCTCAATGTTGTCTCC 1232711 >seq7 Length=2824016 Score = 268 bits (296), Expect = 7e-67 Identities = 586/861 (68%), Gaps = 30/861 (3%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||||||||| || |||||||||||||| | || ||| | ||| || Sbjct 1202573 ATCTGGCAAATGTACAAAAAGGCCGAGGCTTCCTTCTGGACCGCCGAAGAGATTGATCTG 1202632 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTT-ATCGA-GCGGTGAACAACATTTCATTA 61201 ||||| || || | |||||| | || | | ||| | | ||| || ||||| Sbjct 1202633 TCCAAGGATCTGCACGACTGGAACAACCGCCTGAACGATGACGAGAAGTAC--TTCATCT 1202690 Query 61202 AACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAAC 61261 || | ||||| |||||||| || || ||||| || ||||| ||||| | | || | Sbjct 1202691 CTCACATCTTGGCTTTCTTTGCTGCCTCCGACGGCATTGTCAACGAGAACCTGGTCGAGC 1202750 Query 61262 GTTTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCC 61320 ||||| || | ||||| || | | ||||| || || |||||||| |||||||| Sbjct 1202751 GTTTCA-GCGGCGAGGTTCAGATCCCCGAGGCTCGATGCTTCTACGGTTTCCAGATCATG 1202809 Query 61321 ATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGG 61380 |||||||| ||||||| |||| ||| | |||||||| || ||| ||| ||||| Sbjct 1202810 ATGGAGAACATCCACTCCGAGACCTACTCCCTGCTCATCGACACCTACGTCAAGGAGCAC 1202869 Query 61381 GCGGAACGTGAACGAT-TGTTCAATGCCATCGAGACGATACCGG----CGGTGAAGCGGA 61435 | || ||| | | ||||| ||||| ||||| || || | || | || Sbjct 1202870 AGCCAGCGC-AACTACCTCTTCAACGCCATTGAGACCATTCCTTGCATCCGTAA----GA 1202924 Query 61436 AAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTA--CATTTGGTGAACGATT 61493 | || || |||||| |||| |||||| ||| |||| | || | |||| | | || | Sbjct 1202925 AGGCTGACTGGGCCATCAAGTGGATC--CAGGACAAGGACTCTTCCTTTGCTCAGCGCCT 1202982 Query 61494 GCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTG 61553 | || ||||| | ||||||||| | || ||||| ||| | |||||| | ||||| || Sbjct 1202983 TGTTGCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGCGGAGCCTTTGCCTCCATCTTCTG 1203042 Query 61554 GTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGA 61613 | | ||||| | || || ||||| || ||||||||| ||| ||| | || || || || Sbjct 1203043 GCTCAAGAAGAGAGGTCTCATGCCTGGCCTGACCTTCTCCAACGAGCTCATCTCTCGTGA 1203102 Query 61614 CGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCC 61673 |||||| |||| || |||||| |||| || | | | ||| ||| || | Sbjct 1203103 CGAGGGTCTGCACACCGACTTTGCTTGCCTGCTC--CACTCTC-ACCTGAAGAACCG--C 1203157 Query 61674 GTCGG--AGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTT 61731 | | | ||||| | | |||| || | ||| || || | ||||| || ||||| Sbjct 1203158 GCCAGCAAGGAGATTATCCGTGAAATCATCACTGATGCCGTCAGAATCGAGCAAGAATTC 1203217 Query 61732 CTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTAT 61791 |||| || ||| | ||| | || | |||||||| || ||| |||||| Sbjct 1203218 TTGACCGAGGCTCTCCCCTGTGCTCTGCTGGGCATGAACGCCACCCTGATGAAGCAGTAC 1203277 Query 61792 ATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACG 61851 ||||| ||||||||||| |||||| | |||| | | || | || ||| || || | Sbjct 1203278 ATTGAGTTTGTTGCCGATCGTCTGCTCGTCGCTCTTGGCAACGAGAAGATTTACAAGTCC 1203337 Query 61852 AAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAG 61911 ||||| ||||| |||||||| | || || |||| |||||||| || || |||||| Sbjct 1203338 TCCAACCCCTTTGACTTCATGGAGAACATCTCCCTGGGCGGCAAGACCAACTTCTTCGAG 1203397 Query 61912 AAACGTGTAGGCGACTATCAA 61932 || ||||| ||||| || ||| Sbjct 1203398 AAGCGTGTCGGCGAGTACCAA 1203418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567888556720