Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20atroviride_20[genbank_20GCA_5F001599035.1_202016-03-
01] 23 sequences; 37,316,984 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq1 304 1e-77
seq7 268 7e-67
>seq1
Length=7294945
Score = 304 bits (336), Expect = 1e-77
Identities = 1142/1761 (65%), Gaps = 54/1761 (3%)
Strand=Plus/Minus
Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136
||| || ||||||||||| | ||| || |||| ||| | || ||||||||||| ||
Sbjct 1234435 ATCAACTGTGAACTGGATAGGTGCAGCCGCAGCCTGGGTACGCAGGTAGTACATGCCAGT 1234376
Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCT 65195
|||||| ||| ||| || ||| ||||| | || |||| |||| | | | || |
Sbjct 1234375 CTTGAGACCAAGCTTCCAGCCAGTGAAGTGCAT-GCTGGTAATCTTGCCCATTGTGGGAT 1234317
Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255
| || || || ||||| ||||| |||||| ||| || |||||| || || | ||
Sbjct 1234316 CCTTCATGTGGATGTTCAAGGACTGGGACTGATCAATGAAAGCACCACGGTCGGCTGACA 1234257
Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCA 65314
| | | ||| | || || |||||||| || |||||||||||| | | | | ||
Sbjct 1234256 TCTGGACGATGTGGCGCTGAGAGATCTCCCAAACAGTCTTGTACAGG-GCCTTGATGTCG 1234198
Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATC 65374
||||| | ||||| ||||| ||||| ||||| ||||| || |||
Sbjct 1234197 GCGGGAATGTTGGGAATGTTCTGGATAGAACCGTTCTCAGCAATGATGCGGTTCTTCATA 1234138
Query 65375 GACTCTGACCACAAACCCAAATCGATAAGATG-TTGAACCAAGTGACGA-TTGATGACTT 65432
| || ||||| | || ||||| ||||| |||| ||| | | |||| || |
Sbjct 1234137 GCATCGGACCAGAGGCCAGTATCGACAAGATCCTTGAG--AAGCCAGGGGTTGACAACCT 1234080
Query 65433 GGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATT 65492
|||||||||| | || ||||| || ||||||||||| ||| ||| || ||| |||
Sbjct 1234079 GGAACTCGCCAGCAAGGACACGTCGCTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCATT 1234020
Query 65493 CAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGT 65552
|| ||||||| || || |||| ||| ||||| |||||||| ||||| | ||| ||
Sbjct 1234019 CATTGTTGCCCAGGATCTGGGAAGTGCTGGCAGTGGGCATGGGGGCGACGAGCAAACTGT 1233960
Query 65553 TTCGCAATCCGTTCATTTCAATGTTGT----GACGCAATTCGTCCCAGTTCCACATCGGT 65608
| || | |||| | | ||| | | || || | |||||| | ||||| |||
Sbjct 1233959 TGCGAATACCGTGCTCCTTAATCTGCTCCTTGA-GCGA---GTCCCACTCCCACA--GGT 1233906
Query 65609 TTATCGTC--GACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTG 65666
| | | ||||||| |||| || || || | || | ||| ||||
Sbjct 1233905 CAGTGGGCTTGACATCC------CACAAGTCAAACTGGAGAATGCCTTCAGAGGCGGGTG 1233852
Query 65667 AACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTG-ACAGCTGGTCTCGAGT 65725
| || ||| || || ||||| |||||||| | | || || ||||||
Sbjct 1233851 ATCCCTTGAATGACTCATAAGGACCCTCGATCTTGGCAATCTCCATAGATGC-CTCGAGG 1233793
Query 65726 GCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCG 65785
|| || || |||||||| || || | || | || || || || |||
Sbjct 1233792 GCAGCGTGGTAGATGGTCTCAAAGATTTGCTTGTTCAACTCGCGAGCTTCGGGTGATTCG 1233733
Query 65786 TACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGA 65845
| || | || || || |||| ||| || ||||| ||||| |||| ||| |||||
Sbjct 1233732 AAAGGAAGACGCAGAGCGAGGAAAGCGTCAGCAAGACCCTGAACACCAACACCAATGGGT 1233673
Query 65846 CGATGACGCAAATTGGAACGTCTCG--CCTCAGGTACAGGGTAGTAATTGATATCGATAA 65903
|| || || || | || || |||| | || |||||||| || | |||||| |
Sbjct 1233672 CGGTGGCGGCTGTT--ACTGTTGCGAGCCTCCTGAACGGGGTAGTAGTTCACATCGATGA 1233615
Query 65904 TGCGATTCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAATCAAAAT 65963
|||| || | || || ||||| | | || ||| | ||| | ||| |
Sbjct 1233614 TGCGGTTGAGGTTACGGACAACCACCTTG--GTAACATCGTGAAGCTTC----TTAAAGT 1233561
Query 65964 GTTTAGGA-CGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGG 66022
| || | | ||| | | || ||||| || || || | ||| || | |
Sbjct 1233560 CAT-AGCAGCCTTCGTTATAGTCG------ACAAAGGCAGGGAGAGCCAAAGAGGCCAAG 1233508
Query 66023 TTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTG 66082
||||||||||| | ||||||||| || | ||||| || || || ||||| || || |
Sbjct 1233507 TTGCAGACAGCGACCTCGTCAGGGGCAGAGTACTCAACGATCTCAGTGCAGAGGTTGGAG 1233448
Query 66083 CAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATC 66142
| || ||||| |||| |||| || || |||||||| ||||| ||||||||||| | |
Sbjct 1233447 CTTCGGATGGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAAAGC 1233388
Query 66143 ATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCC 66202
|| | || | || |||||| |||| ||| | ||||| || ||| || | ||
Sbjct 1233387 ATAAAGGGGTTACCAGTCTCAGTCTGGGCCTCTAGGATGGAGTACCACAGCTTCTGAGCT 1233328
Query 66203 TTCACCGTACGTACCGCCCTACCTTTGCGT-TCGTAATGTTCGTAGAGGTGTTCGAAGGA 66261
| || | | | |||| | | | | ||||| | || || || |||||
Sbjct 1233327 CGGATAGT-CTTGCGACCCTTGCCCTCCTTCTCGTACTTCTCATACAGAGCCTCGAATTC 1233269
Query 66262 TTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACC 66321
||| || | || | || | || || | || || ||||||| | ||| ||
Sbjct 1233268 TTCGCCATAGCAGTCAGCAAGGCCAGGGCATTCGTTGGGGCACATCAAAGTCCAGTCCAA 1233209
Query 66322 ATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCG 66381
| || || ||||| ||| || |||||||| |||||||| ||| ||| || || ||
Sbjct 1233208 GTTCTTCTCAACACGCTTCATGAACAGATCAGGGATCCAGAGAGCGAGGAACAGGTCACG 1233149
Query 66382 TGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGC 66441
|| || ||| || ||||||| || ||||| | ||| ||||||||||||| |||||
Sbjct 1233148 GGCACGGACCTCTTCCTTGCCGTGGTTCTTGCGGAGGTCAAGGAACTCAAAGACATCGGC 1233089
Query 66442 ATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGAC 66501
||||| || || ||||||||||| || | || || ||| |||||| ||||||||
Sbjct 1233088 GTGCCAAGGCTCGAGGTAGATGGCAAAGGCACCAGGGCGCTTGTTGCCACCCTGGTCGAC 1233029
Query 66502 GTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATT 66561
||| | || ||||||||||| || | ||| || | || ||||| || | || ||
Sbjct 1233028 GTATCTGGCAGTGTTGTTGAAGACTCGAAGCATGGGGATGATACCGTTGGAGGTACCGTT 1232969
Query 66562 GGTGCCGTCGATGGGGGATCCTCGT-GCCCGTATATCGTGAACATTCAGACCAATACCAC 66620
||||||| | ||| || || ||| || || ||| ||| || ||||| || |||||||
Sbjct 1232968 GGTGCCGGCAATGTAAGAGCC-CGTAGCACGGATACGGTGGACGTTCAGGCCGATACCAC 1232910
Query 66621 CGGCCGTCTTCGAGATGGCAGCACA-ATC-GGCCACTGTCCGGAATATGCCGTCAATGGA 66678
| ||| |||| || || ||||| || | |||| | | || || ||||||
Sbjct 1232909 CAGCCATCTTGGAAATCATGGCACATGTCTTTAGAGTGTC--GTAGATACCCTCAATGCT 1232852
Query 66679 GTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGA 66738
||| |||| ||| || ||| ||||||| || || | || || || | ||
Sbjct 1232851 GTCGTCCTTCATGTCCACCAGGAAGCATGAGGACAGCTGAGCTTGTGGGGTACCAGCGTT 1232792
Query 66739 GAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGAT 66798
|||||||||||| | || || |||||| | | || |||||| | ||| ||||| |
Sbjct 1232791 GAAGAGGGTGGGAGAGGCATGGGTAAAGAATTTGCTGGACATGAGGTGGTATGTCTCAAG 1232732
Query 66799 GACAGCATCAATGTTTTCGCC 66819
|||| |||||||| || ||
Sbjct 1232731 GACACGCTCAATGTTGTCTCC 1232711
>seq7
Length=2824016
Score = 268 bits (296), Expect = 7e-67
Identities = 586/861 (68%), Gaps = 30/861 (3%)
Strand=Plus/Plus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||||||||| || |||||||||||||| | || ||| | ||| ||
Sbjct 1202573 ATCTGGCAAATGTACAAAAAGGCCGAGGCTTCCTTCTGGACCGCCGAAGAGATTGATCTG 1202632
Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTT-ATCGA-GCGGTGAACAACATTTCATTA 61201
||||| || || | |||||| | || | | ||| | | ||| || |||||
Sbjct 1202633 TCCAAGGATCTGCACGACTGGAACAACCGCCTGAACGATGACGAGAAGTAC--TTCATCT 1202690
Query 61202 AACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAAC 61261
|| | ||||| |||||||| || || ||||| || ||||| ||||| | | || |
Sbjct 1202691 CTCACATCTTGGCTTTCTTTGCTGCCTCCGACGGCATTGTCAACGAGAACCTGGTCGAGC 1202750
Query 61262 GTTTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCC 61320
||||| || | ||||| || | | ||||| || || |||||||| ||||||||
Sbjct 1202751 GTTTCA-GCGGCGAGGTTCAGATCCCCGAGGCTCGATGCTTCTACGGTTTCCAGATCATG 1202809
Query 61321 ATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGG 61380
|||||||| ||||||| |||| ||| | |||||||| || ||| ||| |||||
Sbjct 1202810 ATGGAGAACATCCACTCCGAGACCTACTCCCTGCTCATCGACACCTACGTCAAGGAGCAC 1202869
Query 61381 GCGGAACGTGAACGAT-TGTTCAATGCCATCGAGACGATACCGG----CGGTGAAGCGGA 61435
| || ||| | | ||||| ||||| ||||| || || | || | ||
Sbjct 1202870 AGCCAGCGC-AACTACCTCTTCAACGCCATTGAGACCATTCCTTGCATCCGTAA----GA 1202924
Query 61436 AAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTA--CATTTGGTGAACGATT 61493
| || || |||||| |||| |||||| ||| |||| | || | |||| | | || |
Sbjct 1202925 AGGCTGACTGGGCCATCAAGTGGATC--CAGGACAAGGACTCTTCCTTTGCTCAGCGCCT 1202982
Query 61494 GCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTG 61553
| || ||||| | ||||||||| | || ||||| ||| | |||||| | ||||| ||
Sbjct 1202983 TGTTGCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGCGGAGCCTTTGCCTCCATCTTCTG 1203042
Query 61554 GTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGA 61613
| | ||||| | || || ||||| || ||||||||| ||| ||| | || || || ||
Sbjct 1203043 GCTCAAGAAGAGAGGTCTCATGCCTGGCCTGACCTTCTCCAACGAGCTCATCTCTCGTGA 1203102
Query 61614 CGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCC 61673
|||||| |||| || |||||| |||| || | | | ||| ||| || |
Sbjct 1203103 CGAGGGTCTGCACACCGACTTTGCTTGCCTGCTC--CACTCTC-ACCTGAAGAACCG--C 1203157
Query 61674 GTCGG--AGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTT 61731
| | | ||||| | | |||| || | ||| || || | ||||| || |||||
Sbjct 1203158 GCCAGCAAGGAGATTATCCGTGAAATCATCACTGATGCCGTCAGAATCGAGCAAGAATTC 1203217
Query 61732 CTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTAT 61791
|||| || ||| | ||| | || | |||||||| || ||| ||||||
Sbjct 1203218 TTGACCGAGGCTCTCCCCTGTGCTCTGCTGGGCATGAACGCCACCCTGATGAAGCAGTAC 1203277
Query 61792 ATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACG 61851
||||| ||||||||||| |||||| | |||| | | || | || ||| || || |
Sbjct 1203278 ATTGAGTTTGTTGCCGATCGTCTGCTCGTCGCTCTTGGCAACGAGAAGATTTACAAGTCC 1203337
Query 61852 AAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAG 61911
||||| ||||| |||||||| | || || |||| |||||||| || || ||||||
Sbjct 1203338 TCCAACCCCTTTGACTTCATGGAGAACATCTCCCTGGGCGGCAAGACCAACTTCTTCGAG 1203397
Query 61912 AAACGTGTAGGCGACTATCAA 61932
|| ||||| ||||| || |||
Sbjct 1203398 AAGCGTGTCGGCGAGTACCAA 1203418
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567888556720
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