Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20gamsii_20[genbank_20GCA_5F001481775.1_202015-12-23] 381 sequences; 37,970,415 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq11 102 3e-19 >seq11 Length=641957 Score = 102 bits (112), Expect = 3e-19 Identities = 109/140 (78%), Gaps = 3/140 (2%) Strand=Plus/Plus Query 352 CGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCG 411 |||| ||||||||| |||||| | || |||||||||| |||| ||| |||| |||| Sbjct 588947 CGCC-GGACTGAGGACCGCGCATCTGCAAGGATGCTGGAGTAAGGGTCACCAGCGACCCG 589005 Query 412 TCTTGGAACACGGACCAAGGAGTCTAACATC-TATGCGAGTGTTTGGGTGTCAAACCCGT 470 ||||| | ||||||||||||||| | || |||||||||||| | ||| || ||| Sbjct 589006 TCTTGAGAGACGGACCAAGGAGTC-GTCTTCGTATGCGAGTGTTCGAGTGCAAACCCCCC 589064 Query 471 GCGCGTAATGAAAGTGAACG 490 |||||||| ||||||||| Sbjct 589065 ATGCGTAATGCAAGTGAACG 589084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079991827550