Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20gamsii_20[genbank_20GCA_5F001481775.1_202015-12-23] 381 sequences; 37,970,415 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq248 134 3e-29 >seq248 Length=2176 Score = 134 bits (148), Expect = 3e-29 Identities = 198/275 (72%), Gaps = 8/275 (3%) Strand=Plus/Minus Query 11 CTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCG 70 ||| |||| |||||| ||| ||||||||||||||| | |||||||| |||| Sbjct 865 CTGTATCTGCACAGCTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGTATCG 806 Query 71 TTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 130 |||| |||||| |||| | | | | ||| | | ||||| ||||||||||||||||||| | Sbjct 805 TTACACCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGACCCT 746 Query 131 TATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGC---TTCGCGT-TAGCTAAC 186 | |||| ||||||| || ||||||| ||| || | | | | || || || Sbjct 745 CA-CGTTAAGGCCGCCTTTAACCGGGGTTTCCGTCTACATCAAATATTAGTATATTCAAT 687 Query 187 CCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCA-CTTTCGTG 245 ||| |||||| |||||||||||||| |||||| ||||| | | ||| | Sbjct 686 TATATCTGTTAACCAGCCGGCACCGGGCAGATATCACACTTTATACTTAGATTTTTAATC 627 Query 246 TTT--GCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 ||| ||| ||||||||||||| | |||||||||| Sbjct 626 TTTCAGCAAAGTGCTGTGTTTTAATTAAACAGTCG 592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260795196352