Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20gamsii_20[genbank_20GCA_5F001481775.1_202015-12-23]
381 sequences; 37,970,415 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq248 134 3e-29
>seq248
Length=2176
Score = 134 bits (148), Expect = 3e-29
Identities = 198/275 (72%), Gaps = 8/275 (3%)
Strand=Plus/Minus
Query 11 CTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCG 70
||| |||| |||||| ||| ||||||||||||||| | |||||||| ||||
Sbjct 865 CTGTATCTGCACAGCTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGTATCG 806
Query 71 TTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 130
|||| |||||| |||| | | | | ||| | | ||||| ||||||||||||||||||| |
Sbjct 805 TTACACCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGACCCT 746
Query 131 TATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGC---TTCGCGT-TAGCTAAC 186
| |||| ||||||| || ||||||| ||| || | | | | || || ||
Sbjct 745 CA-CGTTAAGGCCGCCTTTAACCGGGGTTTCCGTCTACATCAAATATTAGTATATTCAAT 687
Query 187 CCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCA-CTTTCGTG 245
||| |||||| |||||||||||||| |||||| ||||| | | ||| |
Sbjct 686 TATATCTGTTAACCAGCCGGCACCGGGCAGATATCACACTTTATACTTAGATTTTTAATC 627
Query 246 TTT--GCAGAGTGCTGTGTTTTTAATAAACAGTCG 278
||| ||| ||||||||||||| | ||||||||||
Sbjct 626 TTTCAGCAAAGTGCTGTGTTTTAATTAAACAGTCG 592
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260795196352
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |