Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20gamsii_20[genbank_20GCA_5F001481775.1_202015-12-23] 381 sequences; 37,970,415 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1 141 2e-31 seq22 105 1e-20 >seq1 Length=1198811 Score = 141 bits (156), Expect = 2e-31 Identities = 113/135 (84%), Gaps = 6/135 (4%) Strand=Plus/Minus Query 122 AGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACG 181 || ||||| |||||||| |||||||||| |||||||||| |||||| || |||||| || Sbjct 871698 AGATCTGTAATGCCCTTGGATGTTCTGGACCGCACGCGCACTACACAGATAGAGCCTTCG 871639 Query 182 AGTTCATCAC-CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGA 240 || ||| |||| || |||| ||||||||||||||||| ||| ||||| ||||||| Sbjct 871638 AG-----CACTCTTGACCAGAAGACCTGGGTAATCTTGTTAATCTCCGTCGTTCTGGGGA 871584 Query 241 TAGAGCATTGCAATT 255 ||||||||||||||| Sbjct 871583 TAGAGCATTGCAATT 871569 Score = 73.4 bits (80), Expect = 7e-11 Identities = 68/85 (80%), Gaps = 1/85 (1%) Strand=Plus/Minus Query 23 CGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGG 82 |||||| | ||||||||||| |||| ||| |||| | ||| |||||||||||| Sbjct 870799 CGAGACGTCAACCTGCTAAACAGCCCATATTGCTCTGGCAGTACGCTGGCTTCTTAGAGA 870740 Query 83 GACTATCGGCTCAAGCCGAT-GGAA 106 || ||||||||||||||||| |||| Sbjct 870739 GATTATCGGCTCAAGCCGATCGGAA 870715 >seq22 Length=507059 Score = 105 bits (116), Expect = 1e-20 Identities = 61/63 (97%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 506997 CCTTGGCCGGAAGGCCTGGGTAATCTTGTTAAACTCCGTCGTGCTGGGGATAGAGCATTG 507056 Query 251 CAA 253 ||| Sbjct 507057 CAA 507059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947196391168