Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20gamsii_20[genbank_20GCA_5F001481775.1_202015-12-23]
381 sequences; 37,970,415 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq1 141 2e-31
seq22 105 1e-20
>seq1
Length=1198811
Score = 141 bits (156), Expect = 2e-31
Identities = 113/135 (84%), Gaps = 6/135 (4%)
Strand=Plus/Minus
Query 122 AGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACG 181
|| ||||| |||||||| |||||||||| |||||||||| |||||| || |||||| ||
Sbjct 871698 AGATCTGTAATGCCCTTGGATGTTCTGGACCGCACGCGCACTACACAGATAGAGCCTTCG 871639
Query 182 AGTTCATCAC-CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGA 240
|| ||| |||| || |||| ||||||||||||||||| ||| ||||| |||||||
Sbjct 871638 AG-----CACTCTTGACCAGAAGACCTGGGTAATCTTGTTAATCTCCGTCGTTCTGGGGA 871584
Query 241 TAGAGCATTGCAATT 255
|||||||||||||||
Sbjct 871583 TAGAGCATTGCAATT 871569
Score = 73.4 bits (80), Expect = 7e-11
Identities = 68/85 (80%), Gaps = 1/85 (1%)
Strand=Plus/Minus
Query 23 CGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGG 82
|||||| | ||||||||||| |||| ||| |||| | ||| ||||||||||||
Sbjct 870799 CGAGACGTCAACCTGCTAAACAGCCCATATTGCTCTGGCAGTACGCTGGCTTCTTAGAGA 870740
Query 83 GACTATCGGCTCAAGCCGAT-GGAA 106
|| ||||||||||||||||| ||||
Sbjct 870739 GATTATCGGCTCAAGCCGATCGGAA 870715
>seq22
Length=507059
Score = 105 bits (116), Expect = 1e-20
Identities = 61/63 (97%), Gaps = 0/63 (0%)
Strand=Plus/Plus
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
|||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 506997 CCTTGGCCGGAAGGCCTGGGTAATCTTGTTAAACTCCGTCGTGCTGGGGATAGAGCATTG 507056
Query 251 CAA 253
|||
Sbjct 507057 CAA 507059
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947196391168
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |