Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20gamsii_20[genbank_20GCA_5F001481775.1_202015-12-23] 381 sequences; 37,970,415 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq1 86.0 2e-14 >seq1 Length=1198811 Score = 86.0 bits (94), Expect = 2e-14 Identities = 102/138 (74%), Gaps = 4/138 (3%) Strand=Plus/Minus Query 141 ATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGA 200 ||||| ||||| ||| ||||||||||| |||||| | || | | || | || ||| Sbjct 788767 ATCGAGCCCTAGCCCCCTGTTACCCGTTGCCACCATGTTTGGACGAGACCCAAACAACGA 788708 Query 201 AAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTA 260 |||||||| || ||| ||| |||| ||||||||||| ||||||| | ||||| Sbjct 788707 AAGTTGATGGG----AAAGTTGGATGAGCCATCGCCGGCACAAGGCCTGTCAATTCGACT 788652 Query 261 AGTTATTATGAATCACCA 278 | |||| |||| |||||| Sbjct 788651 ACTTATCATGATTCACCA 788634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510394245376