Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03- 07] 63 sequences; 38,329,450 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq26 132 1e-28 >seq26 Length=25971 Score = 132 bits (146), Expect = 1e-28 Identities = 198/276 (72%), Gaps = 10/276 (4%) Strand=Plus/Minus Query 11 CTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCG 70 ||| |||| |||||| ||| ||||||||||||||| | |||||||| |||| Sbjct 23606 CTGTATCTGCACAGCTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGTATCG 23547 Query 71 TTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 130 |||| |||||| |||| | | | | ||| | | ||||| ||||||||||||||||||| | Sbjct 23546 TTACACCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGACCCT 23487 Query 131 TATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGC-----TTCGCGTTAGCTAA 185 | |||| ||||||| || ||||||| ||| || | | | || | | || || Sbjct 23486 CA-CGTTAAGGCCGCCTTTAACCGGGGTTTCCGTCGACATCAAATATTAGTG-TATTCAA 23429 Query 186 CCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCA-CTTTCGT 244 || |||||| |||||||||||||| |||||| ||||| | | ||| | Sbjct 23428 TTATCTCTGTTAACCAGCCGGCACCGGGCAGATATCACACTTTATACTTAGATTTTTAAT 23369 Query 245 GTTT--GCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 ||| ||| ||||||||||||| | |||||||||| Sbjct 23368 CTTTCAGCAAAGTGCTGTGTTTTAATTAAACAGTCG 23333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260799205696