Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03- 07] 63 sequences; 38,329,450 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq4 226 2e-54 seq8 208 6e-49 >seq4 Length=2906552 Score = 226 bits (250), Expect = 2e-54 Identities = 1205/1891 (64%), Gaps = 74/1891 (4%) Strand=Plus/Minus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 ||| || ||||| || || | | ||| || |||| || | || |||||||||||||| Sbjct 974840 ATCAACGGTGAATTGAATAGGAGCAGCCGCGGCCTGAGTACGCAGGTAGTACATGCCGGT 974781 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCT 65195 |||||| ||| ||| || ||| ||||| | || |||| |||| | | | || | Sbjct 974780 CTTGAGACCAAGCTTCCAGCCAGTGAAGTGCAT-GCTGGTAATCTTGCCCATTGTGGGAT 974722 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255 | || || || |||| ||||| |||||| ||| || ||||||||| || |||| Sbjct 974721 CCTTCATGTGGATGTTCAGGGACTGGGACTGATCAATGAAAGCACCACGATCAGCTGCCA 974662 Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCA 65314 | | | || | || || |||||||||||||||||||| ||| | | | | || Sbjct 974661 TCTGGACAATTTGGCGCTGAGAAATCTCCCAGACGGTCTTGTAAAGG-GCCTTGATATCT 974603 Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATC 65374 || || | |||| ||| | || || ||||| || || || ||| Sbjct 974602 TCGGGGATGTTGGGGATGTTCTGAATGGAGCCGTTCTCAGCAATGATACGGTTCTTCATG 974543 Query 65375 GACTCTGACCACAAACCCAAATCGATAAGATG-TTGAACCAAGTGACGA-TTGATGACTT 65432 | || ||||| | || |||| || | |||| ||| | | |||| |||| Sbjct 974542 GCATCGGACCAGAGGCCGGTGTCGACCAGGTCCTTGAG--AAGCCAGGGGTTGACAACTT 974485 Query 65433 GGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATT 65492 |||||||||||| || ||||| || ||||||||||| ||| ||| || ||| | | Sbjct 974484 GGAACTCGCCGGCAAGGACACGTCGCTGGTAGATGTTGGAAGTGTAGGGCTCGAAGCACT 974425 Query 65493 CAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGT 65552 | ||||||| ||||| |||| ||| ||||||||||| || |||| | ||| || Sbjct 974424 CGTTGTTGCCCAGAATCTGGGACGTACTGGCAGTTGGCATAGGGGCGAGGAGCAAGCTGT 974365 Query 65553 TTCGCAATCCGT--TCATTTCAATGTTG--TGACGCAATTCGTCCCAGTTCCACATCGGT 65608 | ||| |||| || || || | ||| || | |||||| | ||||| ||| Sbjct 974364 TGCGCGTACCGTGCTCCTTGATCTGCTCCTTGA-GCGA---GTCCCACTCCCACA--GGT 974311 Query 65609 TTATCGTC--GACATCCACGGGCCACATATCCTGTTGCAGGGTTCC----GATACTGGCC 65662 | | ||||||| ||||| || ||| ||| | || ||| || Sbjct 974310 CAGAGGGCTTGACATCC------CACATGTCGAATTGGAGGATGCCCTCGGAT----GCA 974261 Query 65663 GGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTG-ACAGCTGGTCTC 65721 ||||| || ||| ||||| |||||| ||||||| | | | || | ||| Sbjct 974260 GGTGATCCCTTGAATGATTCGTAGGGACCCTCCACCTTGGCGATCTCCATAGAAGC-CTC 974202 Query 65722 GAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCT 65781 || || ||| || |||||||| || || | || || | ||| ||||| Sbjct 974201 AAGGGCCGCATGGTAGATGGTCTCAAAGATCTGCTTGTTCAGCTGACGAGCCTCGGGAGA 974142 Query 65782 CTCGTACGGCATACCCATCAGGACAA---AAGTGTCGGCCAGACCTTGAACTCCAATACC 65838 ||| | ||||| | || || ||| ||| |||||| ||||| || || |||| ||| Sbjct 974141 CTCAAAGGGCATGCGCA---GGGCAAGGAAAGCGTCGGCAAGACCCTGGACACCAACACC 974085 Query 65839 GATGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATC 65898 ||||| || || |||| ||| | ||||| | |||||||||| ||||| ||| Sbjct 974084 AATGGGTCGGTGGCGCATGTTGCTGTTGCGGGCCTCCTGGACAGGGTAGTGATTGACATC 974025 Query 65899 GATAATGCGATTCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAATC 65958 || || || | ||||| ||||| | || | || | ||| | Sbjct 974024 AATGATCTTGTTGAGGTTGCGGACAACCACCTTGGTGA--CTTCATGAAGCTTC----TT 973971 Query 65959 AAAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGC 66018 ||| | | || | | | || |||| | | || ||||| | ||| || Sbjct 973970 AAAGTCAT-AGCAGCCTTCGTTGTAATCGACATAAGCA-----GGGAGGGCCAAAGAGGC 973917 Query 66019 GAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATT 66078 | |||||| ||||| | ||| || ||||| ||||||| ||| |||||||| || || Sbjct 973916 CAAGTTGCAAACAGCAACCTCATCTGGAGCACAGTACTCGATAATCTCGGTGCAGAGGTT 973857 Query 66079 ACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTA 66138 || ||| ||||| |||| |||| || || |||||||| ||||| ||||||||||| Sbjct 973856 GGAGCTGCGGATGGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTA 973797 Query 66139 CATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGA----G 66194 | |||| | || | || |||||| |||| || | ||||| | ||| || | Sbjct 973796 GAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCTTCCAGGATGGAATACCACAGCTTCTG 973737 Query 66195 CGCGTGCCTTCACCGTACGTAC-CGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGT 66253 ||| | | | || || | || || |||| || || | || || | Sbjct 973736 GGCGCGGATGGTC-GTGCGACCACGTCCCTCCTTC----TCATACTTCTCATACAAAGCC 973682 Query 66254 TCGAAGGATTCACCCCATACT--TCGGACAGACATGGACACTTGTGTGGACACATCAGCG 66311 ||||| | | | ||||| || | || | || || | || || |||||||||| Sbjct 973681 TCGAAT--TCCTCGCCATAGCAGTCAGCAAGGCCAGGGCATTCGTTGGGGCACATCAGCG 973624 Query 66312 ACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGA 66371 ||| || | || ||| ||||| ||| || ||||| || |||||||| || || Sbjct 973623 TCCAGTCCAAGTTCTTTTCAACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCAAGGA 973564 Query 66372 AGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAA 66431 | | || || || || ||| || ||||||| || ||||| | || |||||||||| Sbjct 973563 ACAAGTCACGGGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGGAGATCAAGGAACTCAA 973504 Query 66432 AGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCAC 66491 ||| |||||| ||||| || || ||||||||||| || | || ||| ||| |||| Sbjct 973503 AGACGTCGGCGTGCCAGGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGTTACCAC 973444 Query 66492 CTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAG 66551 | || ||||| || | || |||||||| || || | ||| || | | ||||||| Sbjct 973443 CCTGATCGACATATCTGGCAGTGTTGTTGAACACTCGAAGCATGGGAATAATACCGTTAG 973384 Query 66552 ATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGAC 66611 | | || |||||||| | ||| || || || || || ||| || |||| | Sbjct 973383 AGGTACCGTTGGTGCCAGCAATGTAAGAGCCGGTGGCACGGATGCGGTGGACGTTCAAGC 973324 Query 66612 CAATACCACCGGCCGTCTTCGAGATGGCAGCACA-ATCGGC-CACTGTCCGGAATATGCC 66669 |||||||||| ||| |||| || || ||||| || | | |||| | | || || Sbjct 973323 CAATACCACCAGCCATCTTGGAAATCATGGCACATGTCTTCAGAGTGTC--GTAGATACC 973266 Query 66670 GTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGT 66729 |||||| || |||| ||| | | | ||||||| || |||| | || || Sbjct 973265 CTCAATGCTATCGTCCTTCATGTCGACCAAGAAGCATGAGGACAGCTGGGCCTGCGGGGT 973206 Query 66730 GGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTA 66789 | || ||| |||||||| | || || || ||| | | || |||||| ||||| Sbjct 973205 ACCTGCGTTGAACAGGGTGGGGGAGGCATGGGTGAAGAACTTGCTGGACATGAGGTTGTA 973146 Query 66790 CGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATCAGGA 66848 ||||| | |||| ||||||| || || || || | | ||| |||||| | | Sbjct 973145 TGTCTCCAGGACACGCTCAATGTCATCTCCCCAGATGCCAACAGACAC-TCGCATAATCA 973087 Query 66849 GGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGG 66908 || || ||||| || || | | | | | | || | ||| || ||||||| | Sbjct 973086 TGTGCTGTGGCCGCTCAACAATCTTGCCATCAAGCTTCAGAAGGTATGACCGTTCCAAAG 973027 Query 66909 TCTTGATACCAAAGTACGAGTAATTGAAATC 66939 |||||| || ||||| ||| ||||| || Sbjct 973026 TCTTGAAGCCGAAGTATTGGTAGTTGAAGTC 972996 >seq8 Length=2103943 Score = 208 bits (230), Expect = 6e-49 Identities = 575/860 (67%), Gaps = 30/860 (3%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || || |||||||| | || ||| | ||| || Sbjct 373459 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAAGAGATTGATCTG 373518 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTT-ATCGA-GCGGTGAACAACATTTCATTA 61201 ||||| || || | |||||| | || | | ||| | | ||| || ||||| Sbjct 373519 TCCAAGGATCTGCACGACTGGAACAACCGCCTGAACGATGACGAGAAGTAC--TTCATCT 373576 Query 61202 AACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAAC 61261 || | |||| ||||||||||| || || || || ||||| ||||| | | || | Sbjct 373577 CTCACATCCTGGCCTTCTTTGCCGCCTCTGATGGCATTGTCAACGAGAACCTGGTCGAGC 373636 Query 61262 G-TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCC 61320 | ||| | | | |||| || | | ||||| || || ||||||||||||||||| Sbjct 373637 GCTTTAGTGGCG-AGGTCCAGATCCCCGAGGCTCGATGCTTCTACGGCTTCCAGATCATG 373695 Query 61321 ATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAG--C 61378 |||||||| ||||||| |||| ||| | ||||||||||| ||||||| |||| | Sbjct 373696 ATGGAGAACATCCACTCCGAGACCTACTCCCTGCTCATCGATACCTACATCAAGGAGAAC 373755 Query 61379 GGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACC-GGCGGT-GAAGCGGAA 61436 | | | | || | ||||| ||||| ||||| || || || | | | ||| Sbjct 373756 AGCCAGCGCAGCTAC--CTCTTCAACGCCATTGAGACCATTCCTTGCATTCGCA--AGAA 373811 Query 61437 AGCGGATTGGGCCTTCAATTGGATCACCAGTACA--ACGGCTACATTTGGTGAACGATTG 61494 || || |||||| |||| ||||| |||| ||| | || | |||| | || || Sbjct 373812 GGCCGACTGGGCCATCAAGTGGAT--CCAGGACAAGAACTCTTCCTTTGCCCAGCGCCTG 373869 Query 61495 CTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGG 61554 | || ||||| | || |||||| | || ||||| || | |||||| | ||||| ||| Sbjct 373870 GTTGCCTTTGCCGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGG 373929 Query 61555 TTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGAC 61614 | ||||| || || || ||||| ||||||||||| ||| ||| | || || || ||| Sbjct 373930 CTCAAGAAGCGAGGTCTCATGCCTGGTCTGACCTTTTCCAACGAGCTCATCTCTCGTGAC 373989 Query 61615 GAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCG 61674 ||||| |||| || ||||| ||| | || | | | || ||| || || Sbjct 373990 GAGGGTCTGCACACCGACTTTGCCTGCCTGC--TGCACTCTC-ACCTCAAGAACCG--CG 374044 Query 61675 TCGG--AGGAGCGTG-TGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTT 61731 | | |||| ||| | |||| || | || || || || || || || || Sbjct 374045 CCAGCAAGGA-AGTGATCCGTGACATCATCACCGATGCTGTCCGAATTGAGCAAGAGTTC 374103 Query 61732 CTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTAT 61791 |||| || ||| | || | | ||| | |||||||| | || ||| |||||| Sbjct 374104 TTGACCGAGGCTCTCCCTTGCGCCCTCCTTGGCATGAACTCCAACCTGATGAAGCAGTAC 374163 Query 61792 ATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACG 61851 ||||| || || ||||| |||||| | |||| | | || | || |||||| || | Sbjct 374164 ATTGAGTTCGTCGCCGATCGTCTGCTTGTCGCTCTCGGCAACGAGAAGATCTACAAGTCT 374223 Query 61852 AAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAG 61911 ||||| || || |||||||| | ||||| || | ||||||||| || || |||||| Sbjct 374224 GCCAACCCCTTCGACTTCATGGAGAACATTTCTCTCGGTGGCAAGACCAACTTCTTCGAG 374283 Query 61912 AAACGTGTAGGCGACTATCA 61931 || || || | |||||| || Sbjct 374284 AAGCGCGTCGCCGACTACCA 374303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567694742320