Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20harzianum_20[genbank_20GCA_5F000988865.1_202015-05-06]
1,572 sequences; 39,721,542 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq1519 248 2e-63
>seq1519
Length=1048
Score = 248 bits (274), Expect = 2e-63
Identities = 151/159 (95%), Gaps = 1/159 (1%)
Strand=Plus/Plus
Query 160 TTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATT 219
|||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||
Sbjct 1 TTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGACAGTCGGGGGCATCAGTATT 60
Query 220 CAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCAC 279
|||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 61 CAATTGTCAGTGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCATTTGC 120
Query 280 CAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318
|||||||||||||||||||||| ||||||||||||||||
Sbjct 121 CAAGGATGTTTTCATTAATCAG-GAACGAAAGTTAGGGG 158
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915185613056
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |