Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20harzianum_20[genbank_20GCA_5F000988865.1_202015-05-06] 1,572 sequences; 39,721,542 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1519 248 2e-63 >seq1519 Length=1048 Score = 248 bits (274), Expect = 2e-63 Identities = 151/159 (95%), Gaps = 1/159 (1%) Strand=Plus/Plus Query 160 TTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATT 219 |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| Sbjct 1 TTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGACAGTCGGGGGCATCAGTATT 60 Query 220 CAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCAC 279 |||||||||| ||||||||||||||||||||||||||||||||||||||||||| || | Sbjct 61 CAATTGTCAGTGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCATTTGC 120 Query 280 CAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 |||||||||||||||||||||| |||||||||||||||| Sbjct 121 CAAGGATGTTTTCATTAATCAG-GAACGAAAGTTAGGGG 158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915185613056