Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20harzianum_20[genbank_20GCA_5F000988865.1_202015-05-06] 1,572 sequences; 39,721,542 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq916 132 1e-28 >seq916 Length=4689 Score = 132 bits (146), Expect = 1e-28 Identities = 198/276 (72%), Gaps = 10/276 (4%) Strand=Plus/Plus Query 11 CTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCG 70 ||| |||| |||||| ||| ||||||||||||||| | |||||||| |||| Sbjct 1311 CTGTATCTGCACAGCTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGTATCG 1370 Query 71 TTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 130 |||| |||||| |||| | | | | ||| | | ||||| ||||||||||||||||||| | Sbjct 1371 TTACACCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGACCCT 1430 Query 131 TATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGC-----TTCGCGTTAGCTAA 185 | |||| ||||||| || ||||||| ||| || | | | || | | || || Sbjct 1431 CA-CGTTAAGGCCGCCTTTAACCGGGGTTTCCGTCGACATCAAATATTAGTG-TATTCAA 1488 Query 186 CCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCA-CTTTCGT 244 || |||||| |||||||||||||| |||||| ||||| | | ||| | Sbjct 1489 TTATCTCTGTTAACCAGCCGGCACCGGGCAGATATCACACTTTATACTTAGATTTTTAAT 1548 Query 245 GTTT--GCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 ||| ||| ||||||||||||| | |||||||||| Sbjct 1549 CTTTCAGCAAAGTGCTGTGTTTTAATTAAACAGTCG 1584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260780180224