Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20harzianum_20[genbank_20GCA_5F000988865.1_202015-05-06] 1,572 sequences; 39,721,542 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq665 269 5e-70 seq467 104 4e-20 >seq665 Length=14153 Score = 269 bits (298), Expect = 5e-70 Identities = 173/189 (92%), Gaps = 6/189 (3%) Strand=Plus/Plus Query 113 CTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAAC 172 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1 CTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGAC 60 Query 173 GTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGT------AACTTTTCT 226 |||||||| |||||||||| |||||||||||||||| |||||||| | |||| | Sbjct 61 GTCGCTATCAACGCTTGGCCGCCACAAGCCAGTTATTCCTGTGGTGGTTGGAGCTTTCTT 120 Query 227 GGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTT 286 ||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct 121 GGCACGTCTAGCCTCCAATGTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTT 180 Query 287 TGTATTCAC 295 ||||||||| Sbjct 181 TGTATTCAC 189 >seq467 Length=26179 Score = 104 bits (114), Expect = 4e-20 Identities = 70/77 (91%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 3 CTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATG 62 |||||| ||||||| ||| || || |||||||||||||||||||||||||||||||| | Sbjct 76 CTAAGCTCAATTACCTTTGCGGTGA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCACG 18 Query 63 ACGGTCTAAACCCAGCT 79 ||||||||||||||||| Sbjct 17 ACGGTCTAAACCCAGCT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854386568832