Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20harzianum_20[genbank_20GCA_5F000988865.1_202015-05-06] 1,572 sequences; 39,721,542 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq428 114 5e-20 >seq428 Length=31006 Score = 114 bits (126), Expect = 5e-20 Identities = 110/141 (78%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 349075 GTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGC 349134 || |||||| |||||||||| ||||| || || || |||||||||| | ||| ||||| Sbjct 20036 GTTGAGAATTTCCTTGAGTCGGGGCACACCGAGTGTGACGTTCTTGGAAGAGACACCGGC 20095 Query 349135 AAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAG 349194 |||||| ||||| | || |||| ||||||| |||||| || ||| ||||| | || || Sbjct 20096 AAAGTGAAAGGTGTTCAGCGTCATCTGCGTGGCGGGCTCACCAATGGACTGGGCGGCAAG 20155 Query 349195 GATGCCTACCATCTCGCCGGG 349215 | ||| ||||| || ||||| Sbjct 20156 AACGCCAACCATTTCACCGGG 20176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084696186618456