Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20harzianum_20[genbank_20GCA_5F001990665.1_202017-02-08] 1,054 sequences; 40,676,380 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq38 482 4e-134 >seq38 Length=550 Score = 482 bits (534), Expect = 4e-134 Identities = 296/314 (94%), Gaps = 1/314 (0%) Strand=Plus/Plus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 |||||||||||||||||||| |||| ||| || |||||||||||||||||||| |||||| Sbjct 141 TGGTCCGGCCGGGCCTTTCCCTCTGCGGAACCCCATGCCCTTCACTGGGTGTGGCGGGGA 200 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 |||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||| Sbjct 201 AACAGGACTTTTACTTTGAAAAAATTAGAGTGCTCAAGGCAGGCCTATGCTCGAATACAT 260 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 261 TAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 320 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct 321 AATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 380 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| || Sbjct 381 ATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAG-GA 439 Query 305 ACGAAAGTTAGGGG 318 |||||||||||||| Sbjct 440 ACGAAAGTTAGGGG 453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915190353792