Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20harzianum_20[genbank_20GCA_5F001990665.1_202017-02-08] 1,054 sequences; 40,676,380 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq1017 488 9e-136 seq230 293 4e-77 >seq1017 Length=943 Score = 488 bits (540), Expect = 9e-136 Identities = 286/295 (97%), Gaps = 1/295 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| ||||||||||| || || |||||||||||||||||||||||||||||||| Sbjct 737 TACTAAGCTCAATTACCATTGCGGTGA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCA 679 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 678 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 619 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 618 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAT 559 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 558 GAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 499 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 498 CAAATGTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 444 >seq230 Length=50958 Score = 293 bits (324), Expect = 4e-77 Identities = 189/207 (91%), Gaps = 5/207 (2%) Strand=Plus/Plus Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 40140 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 40199 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||| Sbjct 40200 CATCGAAGGATCAAAAAGCGACGTCGCTATCAACGCTTGGCCGCCACAAGCCAGTTATCC 40259 Query 211 CTGTGGT-----AACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCG 265 ||||||| |||| ||||||||||||||||| ||| ||||| ||||||||||||| Sbjct 40260 CTGTGGTGGTTATACTTCCCTGGCACCTCTAGCCTCTAATGTCGAGAGACTAAAGGATCG 40319 Query 266 ATAGGCCACACTTTCATGGTTTGTATT 292 |||| |||||||||||| || ||||| Sbjct 40320 ATAGATCACACTTTCATGATTGGTATT 40346 Score = 131 bits (144), Expect = 3e-28 Identities = 83/89 (93%), Gaps = 1/89 (1%) Strand=Plus/Plus Query 4 TAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGA 63 ||||| ||||||||||| || || |||||||||||||||||||||||||||||||| || Sbjct 39588 TAAGCTCAATTACCATTGCGGTGA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCACGA 39646 Query 64 CGGTCTAAACCCAGCTCACGTTCCCTATT 92 ||||||||||||||||||||||||||||| Sbjct 39647 CGGTCTAAACCCAGCTCACGTTCCCTATT 39675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854390994624